FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008131436

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008131436
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1383
Total Bases200.5 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC59

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA88263.77440347071583No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAA825.929139551699205No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTC765.49530007230658No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCTGCATAGACCAA120.8676789587852495No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATGATGCCTGCATAGACCAAG120.8676789587852495No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG120.8676789587852495No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGATTGATGCCTGCATAGACCAAG110.7953723788864787No Hit
CCATTAGTGGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG110.7953723788864787No Hit
CCATTAGTGAGCTGGCCAACCTGTGATGATTGATGCCTGCATAGACCAAG100.7230657989877078No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCCTGCATAGACCAAG100.7230657989877078No Hit
CCATAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG90.6507592190889371No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATATTGATGCCTGCATAGACCAAG80.5784526391901663No Hit
CCTTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG80.5784526391901663No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC80.5784526391901663No Hit
CCATTAGTGAGCTGGCCAAACCCTGTGATGATTGATGCCTGCATAGACCA70.5061460592913956No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAGATTGATGCCTGCATAGACCAAG60.43383947939262474No Hit
CCATTGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.43383947939262474No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT60.43383947939262474No Hit
CCATTAGTGAGCTGGCCACCCTGTGATGATTGATGCCTGCATAGACCAAG60.43383947939262474No Hit
CCATTAGTGACTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG50.3615328994938539No Hit
CCATTAGTGAGCTGGCCAACCCTGGATGATTGATGCCTGCATAGACCAAG50.3615328994938539No Hit
CCATTAGTGAGCTGGCCAACCCTTGATGATTGATGCCTGCATAGACCAAG40.28922631959508316No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAGCCTGCATAGACCAAG40.28922631959508316No Hit
CCATTAGTGAGCTGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.28922631959508316No Hit
AGATCATGTACGTCGAGGATAAAGGCAACGTCTGCATAGACCAAGTCTCT30.21691973969631237No Hit
CCATTAGTAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.21691973969631237No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTGCATAGACCAAG30.21691973969631237No Hit
AGATCATGTACGTCGGGGAGGATAAAAGGCAACGTCTGCATAGACCAAGT30.21691973969631237No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATAGATGCCTGCATAGACCAA30.21691973969631237No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACAAA30.21691973969631237No Hit
CCATTAGGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.21691973969631237No Hit
CCATTAGTGAGTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.21691973969631237No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATGATGCCTGCATAGACCAAG30.21691973969631237No Hit
CCATTAGTGAGCTGGCCAAACCTTGATGATTGATGCCTGCATAGACCAAG30.21691973969631237No Hit
CATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAAG30.21691973969631237No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATCCTGCATAGACCAAG30.21691973969631237No Hit
CCATTAGTGAGCTGGTCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.14461315979754158No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCTGCAAAGACCAA20.14461315979754158No Hit
CCATTAGAGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.14461315979754158No Hit
CCATTATGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG20.14461315979754158No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGCTGCATAGACCAAGTCT20.14461315979754158No Hit
AGATCATGTACGTCGGGGACGATAAAGGCAACGTCTGCATAGACCAAGTC20.14461315979754158No Hit
CCATTAGTAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAAG20.14461315979754158No Hit
AGATCATGTACGTGGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTC20.14461315979754158No Hit
AGATCATGTACGTCGGGGATAAAGGCAACGTCTGCATAGACCAAGTCTCT20.14461315979754158No Hit
CCATTAGTGAGCTGGCCAACCCTGTGTGATTGATGCCTGCATAGACCAAG20.14461315979754158No Hit
AGATCATGTACGTCGGGGGGATAAAGGCAACGTCTGCATAGACCAAGTCT20.14461315979754158No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGTGCCTGCATAGACCAAG20.14461315979754158No Hit
CCAATAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.14461315979754158No Hit
CCATTAGTGAGCTGGCTAACCCTGTGATGATTGATGCCTGCATAGACCAA20.14461315979754158No Hit
AGATCATGTACGTCGGGGAGGATAAAGCAACGTCTGCATAGACCAAGTCT20.14461315979754158No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATGCCTGCATAGACCAAG20.14461315979754158No Hit
CCATTAGTGAGTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAAG20.14461315979754158No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)