FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008131552

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008131552
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1267
Total Bases183.7 kbp
Sequences flagged as poor quality0
Sequence length145
%GC59

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA81664.40410418310971No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAA826.471981057616416No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTC786.156274664561957No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG151.1838989739542225No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT120.9471191791633782No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCCTGCATAGACCAAG90.7103393843725335No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATGATGCCTGCATAGACCAAG80.6314127861089187No Hit
CCATTAGTGAGCTGGCCACCCTGTGATGATTGATGCCTGCATAGACCAAG80.6314127861089187No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAGATTGATGCCTGCATAGACCAAG70.5524861878453038No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGATTGATGCCTGCATAGACCAAG70.5524861878453038No Hit
CCATTAGTAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.4735595895816891No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATATTGATGCCTGCATAGACCAAG60.4735595895816891No Hit
CCATTAGTGAGCGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.4735595895816891No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAGCCTGCATAGACCAAG60.4735595895816891No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTATGCCTGCATAGACCAAG50.3946329913180742No Hit
CCATTAGTGGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG50.3946329913180742No Hit
CCTTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.31570639305445936No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTGCATAGACCAAG40.31570639305445936No Hit
CCATAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.31570639305445936No Hit
CCATTAGTGAGCTGGCCAACCCTGGATGATTGATGCCTGCATAGACCAAG40.31570639305445936No Hit
CCATTGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.31570639305445936No Hit
CCATTAGTGAGTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.31570639305445936No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGACTGCATAGACCAA40.31570639305445936No Hit
AGATCATGTACGTCGGGGACCGCTACATTGCCTCGTGGACCGCTACATTG40.31570639305445936No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATCCTGCATAGACCAAG40.31570639305445936No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCTGCATAGACCAA30.23677979479084454No Hit
CCATTAGTGAGCTGGCCAACCCTTGATGATTGATGCCTGCATAGACCAAG30.23677979479084454No Hit
CCATTATGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.23677979479084454No Hit
CCATTAGTGAGCTGGCAAACCCTGTGATGATTGATGCCTGCATAGACCAA30.23677979479084454No Hit
CCATTAGGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.23677979479084454No Hit
AGATCATGTACGTCGGGGGGATAAAGGCAACGTCTGCATAGACCAAGTCT30.23677979479084454No Hit
CCATTAGTGAGCTGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.23677979479084454No Hit
CCATTAGTGACTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG20.15785319652722968No Hit
CCATTAGTGAGCTGGCCAACCCTGTGGTGATTGATGCCTGCATAGACCAA20.15785319652722968No Hit
CCATTAGGACTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAGT20.15785319652722968No Hit
CCATTAGTGAGCTGGCCAAACCCTGTGATGATTGATGCCTGCATAGACCA20.15785319652722968No Hit
AGATCATGTACGTCGGGGAGATAAAGGCAACGTCTGCATAGACCAAGTCT20.15785319652722968No Hit
CCATTAGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAGT20.15785319652722968No Hit
CCATTAGTGAGCTGGCCAAACCCGTGATGATTGATGCCTGCATAGACCAA20.15785319652722968No Hit
CCATTAGTGAGCCGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.15785319652722968No Hit
CCATTAGTGCGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.15785319652722968No Hit
AGATCATGTACGTCGGGGATAAAGGCAACGTCTGCATAGACCAAGTCTCT20.15785319652722968No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGTGCCTGCATAGACCAAG20.15785319652722968No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCTGCATAGACCAAG20.15785319652722968No Hit
AGATCATGTACGTCGGGGAGGATAAAGCAACGTCTGCATAGACCAAGTCT20.15785319652722968No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATGCCTGCATAGACCAAG20.15785319652722968No Hit
CATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAAG20.15785319652722968No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAATGCCTGCATAGACCA20.15785319652722968No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)