FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008131554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008131554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1255
Total Bases181.9 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC59

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA79663.42629482071713No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAA907.171314741035857No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTC715.657370517928287No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCTGCATAGACCAA110.8764940239043826No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG100.796812749003984No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCCTGCATAGACCAAG90.7171314741035857No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGATTGATGCCTGCATAGACCAAG90.7171314741035857No Hit
CCATTAGTGGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG90.7171314741035857No Hit
CCATTAGTGAGCTGGCCAACCTGTGATGATTGATGCCTGCATAGACCAAG80.6374501992031872No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATATTGATGCCTGCATAGACCAAG70.5577689243027889No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAGATTGATGCCTGCATAGACCAAG70.5577689243027889No Hit
CCATTGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG70.5577689243027889No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCT70.5577689243027889No Hit
CCATTAGTAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.4780876494023904No Hit
CCATTAGTGAGCTGGCCAAACCCTGTGATGATTGATGCCTGCATAGACCA60.4780876494023904No Hit
CCATAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG60.4780876494023904No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAGCCTGCATAGACCAAG60.4780876494023904No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCTGCATAGACCAAG50.398406374501992No Hit
CCATTAGTGAGCTGGCCAACCCTGGATGATTGATGCCTGCATAGACCAAG50.398406374501992No Hit
CCATTAGTGAGCTGGCCACCCTGTGATGATTGATGCCTGCATAGACCAAG50.398406374501992No Hit
CCATTAGTGAGTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG50.398406374501992No Hit
CCATTAGTGACTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.3187250996015936No Hit
CCTTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG40.3187250996015936No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATGATGCCTGCATAGACCAAG40.3187250996015936No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGTCTGCATAGACCAA40.3187250996015936No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTATGCCTGCATAGACCAAG40.3187250996015936No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATCCTGCATAGACCAAG40.3187250996015936No Hit
CCATTAGTGAGCTGGCCAAACCGTGATGATTGATGCCTGCATAGACCAAG30.2390438247011952No Hit
CCATTATGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG30.2390438247011952No Hit
CCATAAGTGAGCTGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAA20.1593625498007968No Hit
CCATTAATGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.1593625498007968No Hit
CCATTAGTTAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.1593625498007968No Hit
CCATTAGTGAGCGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAAG20.1593625498007968No Hit
CCATTAGTGAGTTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.1593625498007968No Hit
CCATTAGCGAGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.1593625498007968No Hit
AGATCATGTACGTCGGGGGAGGATAAAGGCAACGTCTGCATAGACCAAGT20.1593625498007968No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCTGCAAAGACCAA20.1593625498007968No Hit
CCATTAGTGAGCTGGCAAACCCTGTGATGATTGATGCCTGCATAGACCAA20.1593625498007968No Hit
AGATCATGTACGTCGGAGGATAAAGGCAACGTCTGCATAGACCAAGTCTC20.1593625498007968No Hit
CCATTAGTGAGCGGCCAAACCTGTGATGATTGATGCCTGCATAGACCAAG20.1593625498007968No Hit
AGATCATGTACGTCGGGGGGATAAAGGCAACGTCTGCATAGACCAAGTCT20.1593625498007968No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATATTGATGCCTGCATAGACCAAG20.1593625498007968No Hit
CCATTAGTGTGCTGGCCAACCCTGTGATGATTGATGCCTGCATAGACCAA20.1593625498007968No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATGCCTGCATAGACCAAG20.1593625498007968No Hit
CCATTAGTGAGCTGGCCATCCCTGTGATGATTGATGCCTGCATAGACCAA20.1593625498007968No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)