FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008131782

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008131782
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences3717
Total Bases537.3 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC183749.421576540220606No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAA83322.4105461393597No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCGAGTTAGACCAA741.9908528383104653No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCGAGTTAGACCAAGTC731.9639494215765403No Hit
CCATTAGTGAGCTGGCCAACCCAAGGTTGCTGGCTATACCTCGAGAAATC441.1837503362927093No Hit
CATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG310.8340059187516815No Hit
AGATCATGTACGTCGGGGAGAGTACGGCGTCGATTCTAAAGTTGGGAGGA220.5918751681463547No Hit
CCATTAGTGAGTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG150.40355125100887806No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG140.3766478342749529No Hit
CCATTAGTAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG140.3766478342749529No Hit
CCATTAGAGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC140.3766478342749529No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG130.3497444175410277No Hit
CCATTATGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG130.3497444175410277No Hit
CCATTAGTGAGCTGGCCAACCCTTGATGATTGATGCCGAGTTAGACCAAG110.29593758407317733No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCAATACCTCGAGAAATC100.26903416733925206No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTCGAGTTAGACCAAGTCT90.24213075060532688No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGATATC90.24213075060532688No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCAGGCTATACCTCGAGAAATC90.24213075060532688No Hit
CCATTAGTGAGCTGGCCACCCTGTGATGATTGATGCCGAGTTAGACCAAG90.24213075060532688No Hit
CCATTAGTGAGCTGGCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG90.24213075060532688No Hit
CCATTAGGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG90.24213075060532688No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCGAGTTAGACCAA90.24213075060532688No Hit
CCATTAGTGAGCTGGCCAACCAAGGTTGCTGGCTATACCTCGAGAAATCG80.21522733387140167No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCACGAGAAATC80.21522733387140167No Hit
CCATAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG80.21522733387140167No Hit
CCATTGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG80.21522733387140167No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAGATTGATGCCGAGTTAGACCAAG70.18832391713747645No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCCATACCTCGAGAAATC70.18832391713747645No Hit
CCTTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG70.18832391713747645No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGACTATACCTCGAGAAATC60.16142050040355124No Hit
CCTTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG60.16142050040355124No Hit
CCATTAGTGAGCTGGCCAAACCAAGGCTGCTGGCTATACCTCGAGAAATC60.16142050040355124No Hit
CCATTAGTGAGCTGGCCAACCCTGGATGATTGATGCCGAGTTAGACCAAG60.16142050040355124No Hit
CCATTAGTGAGCGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG60.16142050040355124No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATGATGCCGAGTTAGACCAAG60.16142050040355124No Hit
CCATTAGTGAGCTGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG60.16142050040355124No Hit
CCATTAGTGAGCTGGTCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC60.16142050040355124No Hit
CAATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC60.16142050040355124No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGATAGACCAA50.13451708366962603No Hit
CCATAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG50.13451708366962603No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGTCGAGTTAGACCAA50.13451708366962603No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGAGCCGAGTTAGACCAAG50.13451708366962603No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCGAGTTAGACCAAG50.13451708366962603No Hit
CCATTAGTGAGCTGGCCAAACCAGGGTTGCTGGCTATACCTCGAGAAATC50.13451708366962603No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGGAATC50.13451708366962603No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGGGAAATC50.13451708366962603No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATGCCGAGTTAGACCAAG40.10761366693570083No Hit
CCATTAGTGGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG40.10761366693570083No Hit
CCATTATGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTATGCCGAGTTAGACCAAG40.10761366693570083No Hit
CCATTGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTCGCTATACCTCGAGAAATC40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCCGGCTATACCTCGAGAAATC40.10761366693570083No Hit
CCATTAGTAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG40.10761366693570083No Hit
CCATTAGTTAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATC40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGATATACCTCGAGAAATC40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAGTC40.10761366693570083No Hit
CCATTAGTGACTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG40.10761366693570083No Hit
CCATTAGTGAGCTGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATCG40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTCGCTGGCTATACCTCGAGAAATC40.10761366693570083No Hit
AGATCATGTACGTCGAGGATAAAGGCAACGTCGAGTTAGACCAAGTCTCT40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGTGCCGAGTTAGACCAAG40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCTCGAGAAATT40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAAACCAAGGTTGCTGGCTATACCCCGAGAAATC40.10761366693570083No Hit
CCATTAGTGAGTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG40.10761366693570083No Hit
CCATTAGTGACTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG40.10761366693570083No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATATTGATGCCGAGTTAGACCAAG40.10761366693570083No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)