FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008131937

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008131937
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences640
Total Bases92.7 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC60

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA36056.25No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCTGGTCTTTGTAGAACCA355.46875No Hit
GCATCAATCATCACAGGTTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA314.84375No Hit
ACGTTGCCTTTATCCTCCCAACTTTAGAATCGACGCCGTACTCTCCCCGA203.125No Hit
GCATCAATATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC71.09375No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGTCTTTGTAGAAC50.78125No Hit
GCATCAATCATCACAGGGTTTGCCAGCTCACTAATGGGGTCTTTGTAGAA50.78125No Hit
ACGTTGCCTTTATCCTCCCGACGTACATGATCTGGTCTTTGTAGAACCAT40.625No Hit
ACGTTGCCTTTATCCTCCCACCAACTTTAGAATCGACGCCGTACTCTCCC40.625No Hit
GCATCAATCATACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC40.625No Hit
GCATCAATCATCACAGGGTTGCCAGCTCACTAATGGGGTCTTTGTAGAAC40.625No Hit
CATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC40.625No Hit
GCATCAATCAACACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA40.625No Hit
GCATCAATCATCACAGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC30.46875No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCATAATGGGGTCTTTGTAGAAC30.46875No Hit
GCATCAATCATCACAGGGTTGGCCACTCACTAATGGGGTCTTTGTAGAAC30.46875No Hit
GCATCATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC30.46875No Hit
GCATCAATCATCCAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC30.46875No Hit
GATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC30.46875No Hit
GCATCAATCATCAAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC30.46875No Hit
ACGTTGCCTTTATCCCCGACGTACATGATCTGGTCTTTGTAGAACCATGT20.3125No Hit
GCATCAATCATCACAGGGTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC20.3125No Hit
GGATGATCCATCACAGGGTTGGCCAGCTCACTATTGGGGTCTTTGTAGAT20.3125No Hit
ACGTTGCCTTTATCCTCGACGTACATGATCTGGTCTTTGTAGAACCATGT20.3125No Hit
GCATCAATCATCACAGGGCTGGCCAGCTCACTAATGGGGTCTTTGTAGAA20.3125No Hit
GCATCAATCATCCAGGTTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC20.3125No Hit
GGTTGGGGCCGCCCCGGGGGGGGGTGGCGACATATCCGGGGGGGGTGGTT10.15625No Hit
GGATGATGCATCACACGGTTGCCAGCTCACTAAAGGGGTCTTTGTAGAAG10.15625No Hit
ACGTTGCCTTTATGGTCCCGACGTACATGATCTGGTCTTTGTAGAACCAT10.15625No Hit
GCATAAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATGTGCTAAGCCAACCAAAACATAACCAAACCGGGGGGGGGGCCCCCG10.15625No Hit
GCATCAATCATCACAGGGTTTGGCCAGCTCACTAATGGGGTCTTTGTAGA10.15625No Hit
TCATCACTCATCACAGGGTTGGCCAGCTCACTAATGGGGGCTTTGTAGAA10.15625No Hit
ACGTTCCTTTATCCTCCCCGACGTACATGATCTGGTCTTTGTAGAACCAT10.15625No Hit
GCATCAATCATCACAGGTTTGGCCAGTCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
GCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN10.15625No Hit
GCATCAATCATCAGTGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GAATCAATCAACACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCTCACAAGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
GCATCAATCATCCCAGGTTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATTAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
ACGTTGCATTACGCCTCACCGACGTACATGATCTGGTCTTTGTAGAACCA10.15625No Hit
ACGTTGCCTTTTTCCTACCAACTTTAGAATCGACGCCGTACTCTCACCGA10.15625No Hit
GCATCAATCATACAGGGTTGGACAGCTCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
GCATCAATAATCACAGGTTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATGTTTCATCACAGGGTTGCCAGCTCACTAATGGGGTGTTAGTTGTTG10.15625No Hit
GCACCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATGTTTGTAGTCTGCCGGCCCGGCCGGGCGGGGGCGCGCGTTTGGTGG10.15625No Hit
GCATAATCATCACTGGGTTGGCCAGCTCACTATGGGGTCTTTGTAGAACC10.15625No Hit
GCATCAATCATCACAGGGTTGGGCAGCTCACTAATGCGGTATTTGTAGAA10.15625No Hit
GCGTTGCCTTTATCCTCCCCGACGTACATGATCTGGTCTTTGTAGAACCA10.15625No Hit
GAATCAATAATCACAGGGTTGGACAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATATCACAGGTTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
ACGTTGCCTTTATCCTCCCCGACGTACATGATCGGTCTTTGTAGAACCAT10.15625No Hit
GATCAATCATCAAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAACC10.15625No Hit
GCATCAATCATCACAGGGGTGGCCAGCTCACTAAGGGGGTCTTAGTAGAC10.15625No Hit
GCATCAATCATCCAGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAACC10.15625No Hit
GCATCAACATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
GCATCAATAATCACAGGGTAGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTATTGGGGTCTTTGTAGAA10.15625No Hit
GTCAATCATCACAGGGTGGCCAGCTCACTAATGGGGTCTTTGTAGAACCA10.15625No Hit
ACGTTGCCTTTATCCTCCCAACTTTAGAATCGACGCCGTACTGCCCCGAC10.15625No Hit
ACGTTGCCTTTATCCTCCCACCAACTTTAGAATCGACGCCGTACCTCTCC10.15625No Hit
GCTTCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCATCATCACGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAACC10.15625No Hit
ACGTTGCCTTTATCCTCCCCGAGGTACATGATCTGGACTTGGTAGAACCA10.15625No Hit
GCATCAAACATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCGGTGTAGAA10.15625No Hit
GCATCATATCCAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAACCA10.15625No Hit
ACCTCAAACATAACAGGGGTGGCCAGCGCAATAATCGGGTCGTTTTAGAA10.15625No Hit
GCATCAAGCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCATGATCACAGGGTTCGCCAGCTCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
GATCAATCATCACAGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAACC10.15625No Hit
GCATCATCATCACAGGGTTTGCAGCTCACTAATGGGGTCTTTGTAGAACC10.15625No Hit
GCAACAATCATCACAAGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGTA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCCTAATGGGTCTTTGTAGAACC10.15625No Hit
ACGTTGCCTTTATCCTCCCGACGTACATGATCTGGTCTTTGTAGCACCAA10.15625No Hit
GCATCAATCTCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
GCGTTGCCTTTATCCTCCCGACGTACATGATCTGGTCTTTGTAGAACCAT10.15625No Hit
GCAGAGATCAGCACAGGGTTGGCCACCTCGCTAATGGGGGCTTTGTAGAG10.15625No Hit
ACGTTGCGTTTATCCTCCCCGACGTACATGATCTGGTCTTTGTAGAACCA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGACTTTGTAGAA10.15625No Hit
ACGTTGCCTTTATCCTCCCAACTTTAGAATCGAAGCCGTACTCTCCCCGA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCTAATGGGGTCTTTGTAGAAAC10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTATGTAGAA10.15625No Hit
GCAGCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGTA10.15625No Hit
TCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGGCTTTGTAGAA10.15625No Hit
GCGTACATGATCTGGTCTTTGTAGAACCATGTCGTCAGTGTAGATCTCGG10.15625No Hit
GCATCAATCGTCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCAGGCTCACTAATGGGGTCTTTGTAGAT10.15625No Hit
GCATCAATCATCATAGGGTTGGCCAGCTCACTAATGGGTCTTTGTAGAAC10.15625No Hit
ACGTTGCCTTTAACCTCCCCGACGTACATGATCTGGTCTTTGTAGAACCA10.15625No Hit
ACATCAATCATAACAGGGTTGGTCAGCTATCTAATGGGGTAGTAGTAGAA10.15625No Hit
GCATCAATCATCACAGGTTTGGCCAGCGCACTAATGGGGTCTTTGGCGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGCA10.15625No Hit
GCAACAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTGGAA10.15625No Hit
GCATCAATCATCACCGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATATCATCAAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAACCA10.15625No Hit
ACGATGCCTTTATCCTCCCCGACGTACAGATCTGGTCTTTGTAGAACCAT10.15625No Hit
GCATCAATCACCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
ACGTTGCCTTTATCCTCCCAACTTTAGAATCGACGCCGTACTCCCCGACG10.15625No Hit
ACGTTGCTTTATCCTCTCAACTTTAGAATCGACGCCGTACTCTCCCCGAC10.15625No Hit
GAATCAATCATCACAGGGTTGGCCAGCTCATAATGGGGTCTTTGTAGAAC10.15625No Hit
GGATCAAACATCACCGGGGTGGCCAGCTCACTAAAGGGGTCTTAGTAGAA10.15625No Hit
GCTCAATCATACAGGGTTGCCAGCTCACTAATGGGGTCTTTGTAGAACCA10.15625No Hit
GCATCAATCATCCCAGGGTAGGGCAGCTCACTAATGGGGTCTTTGTTGAA10.15625No Hit
GCATCAATATAAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAACCA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAAAGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCATAATGGGTCTTTGTAGAACC10.15625No Hit
GCATCAATCATCAACGTTTGGGCCAGAGCAAGACTGTGGTCTTTTTCGAC10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTATGGGGTCTTTGTAGAAC10.15625No Hit
ACGTTGCCTTTATCCTCCCCCACGTACATGATCTGGTCTTTGTAGAACCA10.15625No Hit
ACGTTGCCTTTATCCTCCCCGACGTAATGATCTGGTCTTTGTAGAACCAT10.15625No Hit
ACGTTGCCTTTATCCTCCCAACTTTAGAATCGACGGCGTACTCTCCCCGA10.15625No Hit
ACGNTGCCTTTATCNNNNNNNNNNNNNNNTCGACGCGGTACTCTCCCCGA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAT10.15625No Hit
ACGTTGCCTTTATCCTCCCACGTACATGATCTGGTCTTTGTAGAACCATG10.15625No Hit
GCATCAATCATCACAGGGTTGGACTCGAGAAATCGCGAGATGTCCCTTTT10.15625No Hit
GCATCAATCATCACAGGGTTGGCAAGCTCACTAAAGGGGTCTTTGTAGAA10.15625No Hit
GCAGCATCACACAGGGAACCCCAGGACTGTAATGGGGAGTTTGTAGAACC10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAC10.15625No Hit
GCATCAATCATCACAGGGTAGGACAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAG10.15625No Hit
GCATCAATCATCACAGGTTTGGCCAGCTCACTAATGGGGTCTTTGTAGAC10.15625No Hit
GCATCAATAATCACAGGCATGTCCAACTCACAAATGGTGTCTTTGAAGAA10.15625No Hit
ACGATGCGTATTAGCACCGCGACGATGTTCTTGTGCACAATGTTGTTGGT10.15625No Hit
GCATCAATCAACTCAGCAAACAACACCTCACTAATCCCCACAATTTAGAA10.15625No Hit
GCATCAATCATCACCGGGTTGGCCAGCTCATAATGGGGTCTTTGTAGAAC10.15625No Hit
GCACAATCATCACAGGGTGGCCAGCTCACTAATGGGGTCTTTGTAGAACC10.15625No Hit
GCATCAATCATCACAGGGTTGGCTAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCCTAATGGGGTCTTTGTAGAAC10.15625No Hit
GCATCAATCATCACAGGGTTGGTCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGTTTGGCCAGCTCACTAATGGGTCTTTGTAGAAC10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGTCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCCCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAAGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
ACGTTGCCTTTATCCTCCCCGCGTACATGATCTGGTCTTTGTAGAACCAT10.15625No Hit
GCATCAATCATCACAGGGTTGGCAAGCTCACTAAAGGGGTCTAAATAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGTGTCTTTGTAGAA10.15625No Hit
ACGGTGCCTTTATCCTCCCCGACGTACATGATCTGGTCTTTGTAGAACCA10.15625No Hit
GCATCAAACATAACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit
GCATCAATCATCACAGGGTTGGCAGCTCACTAATGGGGTCTTTGTAGAAC10.15625No Hit
GCATCAATCATCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTTTAGAA10.15625No Hit
GCATCAATCCTCACAGGGTTGGCCAGCTCACTAATGGGGTCTTTGTAGAA10.15625No Hit

[FAIL]Adapter Content

Adapter graph