FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008131938

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008131938
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences503
Total Bases72.9 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC59

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAA31161.82902584493042No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCGAGTTAGACCAA397.75347912524851No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCGAGTTAGACCAAGTC254.970178926441352No Hit
CATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG61.1928429423459244No Hit
CCATTAGTGAGCTGGCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG50.9940357852882704No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCGAGTTAGACCAA50.9940357852882704No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATCCGAGTTAGACCAAG40.7952286282306162No Hit
CCATTAGTGAGCGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG40.7952286282306162No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCGAGTAAGACCAA30.5964214711729622No Hit
CCATTAGTGAGCTGGCCAACCCTGTGAGATTGATGCCGAGTTAGACCAAG30.5964214711729622No Hit
CCATTAGTGAGCTGGCCAACCTGTGATGATTGATGCCGAGTTAGACCAAG30.5964214711729622No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGGTGCCGAGTTAGACCAA30.5964214711729622No Hit
CCATTAGTGAGTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG20.3976143141153081No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATGCCGAGTTAGACCAAG20.3976143141153081No Hit
CCATTAGTGAGCTGGCCAACCCAGTGATGATTGATGCCGAGTTAGACCAA20.3976143141153081No Hit
CCATTGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG20.3976143141153081No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTAAGACCAA20.3976143141153081No Hit
CCATTAGTGAGCTGGCCAAACTGTGATGATTGATGCCGAGTTAGACCAAG20.3976143141153081No Hit
CCATTAGTGAGCTGGCCAACCCTTGATGATTGATGCCGAGTTAGACCAAG20.3976143141153081No Hit
AGATCATGTACGTCGGGGAGAGTACGGCGTCGATTCTAAAGTTGGGAGGA20.3976143141153081No Hit
CCATTAGTGAGCTGGCCAAACCCTGTGATGATTGATGCCGAGTTAGACCA20.3976143141153081No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATTGATCCGAGTTAGACCAAG20.3976143141153081No Hit
CCATTAGTGAGCTGGCCAACCCTGTGTGATTGATGCCGAGTTAGACCAAG20.3976143141153081No Hit
AGATCATGTACGTCGGGAGGATAAAGGCAACGTCGAGTTAGACCAAGTCT20.3976143141153081No Hit
CCATTAGTGAGCTGGCAAACCCTGTGATGATTGATGCCGAGTTAGACCAA20.3976143141153081No Hit
CCATTAGAGAGCTGGCTAACCCTGTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACAAA10.19880715705765406No Hit
ACATTAGTGAGCTGGCCAAACCTCTGATGATAGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGAATGATGCCGAGTTAGACCAA10.19880715705765406No Hit
AGATCATGTACGTCGGGGAGGATAAAGCAACGTCGAGTTAGACCAAGTCT10.19880715705765406No Hit
CCATTAGAGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
AGATCATGTACGTCGGCGAGGATAAAGGCAACGTCGAGTTAGACCAAGTC10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGACTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGACGAGTTAGACCAAGTC10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTCTCATCATAGATGCCGAGTTAGACCAA10.19880715705765406No Hit
AGATCATGTACGTCGAGTTAGACCAAGTCTCTGCTACCGTAACGGTGCTA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
AGATCATGTACGTCGGGGATAAAGGCAACGTCGAGTTAGACCAAGTCTCT10.19880715705765406No Hit
CCATTAGTGAGTGGCCAAACCTGTGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGAGCTGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGACTGGCCAAACCTGTGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCCGTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATAGATGCCGAGTTAGACAAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCACCCTGTGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACACTGACGACATGGTTCTACAAAGACCCCAT10.19880715705765406No Hit
CCATTAGTGAGCTGCCCAACCCTGAGATGATTCATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAAACCTGTGATGATAGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGACGACATGGATCTACAAATACACCAT10.19880715705765406No Hit
AGAACATGTACGTCGGGGAGGATAAAGGCAACGACGAGATAGACCAAGTC10.19880715705765406No Hit
CCAATAGTGAGCTGGCCAAACCTGTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CAATTAGTGAGCTGGCCAAACCTTGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTATGCCGAGATAGACCAAG10.19880715705765406No Hit
CCATTAATGAGCTGGCCAACCCTGTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGTCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCAGGCCAACCCTCTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
AGATCATGTACGTCGGGGAGAGTACGGCGTCGATACTAAAGTTGGTGAGG10.19880715705765406No Hit
AGATCATGTACGTCGGAGGATAAAGGCAACGTCGAGTTAGACCAAGTCTC10.19880715705765406No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGCCGAGTTAGACCAAGTC10.19880715705765406No Hit
AGATCATGTACGCGGGGAGGATAAAGGCAACGTCGAGTTAGACCAAGTCT10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGTTTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGACCAACCCTGTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CATTAGTGAGCTGGCCAAACCTGTGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
AGATCGTGTACGTCGGGGAGGATAAAGGCAACGTCGAGTTAGACCAAGTC10.19880715705765406No Hit
AGATCATGTACGTCGGGGAGAGTACGGCGTCGAATCTAAAGTTGGGAGGA10.19880715705765406No Hit
AGATCATGTACGTGGGGAGGATAAAGGCAACGTCGAGTTAGACCAAGTCT10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCGAGAAAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAAACCTGGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CAATTAGTGAGCTGGCCAACCCTGTGATGATAGAAGCCGAGATAGACCAA10.19880715705765406No Hit
AGATCATGTACGTCGGGGAGGATAAAGGCAACGTCGAGTTAGACAAAGTC10.19880715705765406No Hit
CCATTAGTAGCTGGCAACCCTGTGATGATTGATGCCGAGTTAGACCAAGT10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGAAGCCGAGTAAGACCAA10.19880715705765406No Hit
AGATCATGTACGTCGGGGAGAGTACGGCGTCGATTCTAAAGTTGGTGGGA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCGTGATGATTGATGCCGAGATAGACCAAG10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGAGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCCCGAGTTAGACCA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTATGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCACACTGACGACAATGGTCTACAAAGACCCCAAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCGGTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCAGGCCAACCCTGTGATGAGTGATGCCGACAAAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTGATGCGCTGTAAGCCCAG10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATTATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGGCTGGCAAACCCTGTGATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACACTGACGACATGGTTCTACAAAGACACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAAACCTGTATGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit
CCATTAGTGAGCTGCCCAACCCTGTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACTCTGTGATGATTGATGCCGAGTTAGACCAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAACCCTGTGATGATAGATGCCGAGTTAGACAAA10.19880715705765406No Hit
CCATTAGTGAGCTGGCCAAACCTGTGAGATTGATGCCGAGTTAGACCAAG10.19880715705765406No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)