FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008132126

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008132126
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences317
Total Bases45.9 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG26182.33438485804416No Hit
CTTCCAGGCCTCCTAGTGTTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG51.5772870662460567No Hit
CTTCCAGGCCTCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA51.5772870662460567No Hit
CTTCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA41.2618296529968454No Hit
CTTCCAGGCCTCCTAGTGCTTCCACTTCTATGCAAATGCCTCCAAGCCAT41.2618296529968454No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGA30.9463722397476341No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCCCCGAGCTCCCAGCAGGG20.6309148264984227No Hit
TTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA20.6309148264984227No Hit
CTTCCAGGCCCCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG20.6309148264984227No Hit
CTTCCAGGCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA20.6309148264984227No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCGGCAGGG20.6309148264984227No Hit
CTTCCAGGTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGAT10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTACCAGCAGGG10.31545741324921134No Hit
CTTCCAGGCCTCCTAGAGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.31545741324921134No Hit
TTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.31545741324921134No Hit
CTTCCAGGCCTGCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.31545741324921134No Hit
CTTCCAGGCATCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCCCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCTCAAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCCCCCAGCAGGG10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCTAGCAGGG10.31545741324921134No Hit
CTTCCAGGCCTCCTGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.31545741324921134No Hit
CTTCCAGGCCTCCTACACTGACGACATGGTTCTACACAATCCCTTCCAGG10.31545741324921134No Hit
CTTCCAGGCCTCCTATGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.31545741324921134No Hit
CTTCCAGGCCTCCTGTGTTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCTTCCACTTCTATGCAAATGCCTCCAAGCTAT10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCTACACTGACGACAGCGATGAGAGTGACAGGA10.31545741324921134No Hit
CTTCCAGGCCTCTGGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCTCCAGGCTCCTCCTCCGAGCACCCAGCAGGG10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCCCTCCGAGCTCCCAGCAGGGA10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTGCTTCCACTTCTATGCAAATGCCTCCAAGCCGT10.31545741324921134No Hit
CTTCCAGGCTTACACTTGGGAAGTAGACCAAGTCTCTGCTACCGTATCGA10.31545741324921134No Hit
TTCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGAT10.31545741324921134No Hit
CTTCCAGGCCTCCTAGTCCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.31545741324921134No Hit
CTTCCAGGCCTCCAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.31545741324921134No Hit
TTCCAGGCCTCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGAT10.31545741324921134No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)