FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008132127

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008132127
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences317
Total Bases45.9 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC57

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG25078.86435331230284No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACAGGCGTGAGCCA51.5772870662460567No Hit
CAAGTGTAAGCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT41.2618296529968454No Hit
CAAGTGTAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT30.9463722397476341No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCCGGCTTGTCCCCCCAGGTGTGTG30.9463722397476341No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCGTGTCCCCCCAGGTGTGTG20.6309148264984227No Hit
CAAGTGAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.6309148264984227No Hit
AAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT20.6309148264984227No Hit
CAAGTGTAAGCCTCGGCAAACAGGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGAGCGTG10.31545741324921134No Hit
CAAGTCTAAGCCACGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCACGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCGGGGTTGGT10.31545741324921134No Hit
CAACTGTTTGGGTGGGCTTTCATTGGGTGGGAACAAGGGTCTGGACTCAC10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAAGCCTGGCTTGTCACCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGCCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAGGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGACCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTAGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTGGAAGGGATTGTGTAGAACCATGTCGTCAGTGTAGAT10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGCGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGTAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCGGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGAG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGACTGGCTTGTCCCCACAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGGGTCGCCAATGCCGGGATGGCAAGTCCCCCCAGGTGTGGG10.31545741324921134No Hit
CAAGTGTAAGCCTCGTCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCAGGTGTGTGT10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGAGTGTG10.31545741324921134No Hit
AAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTTAGCCTCGGCAAACAAGGCCTGGCTCGTCCCCCCAGGTGTGTGTT10.31545741324921134No Hit
CAAGTGTAAGCCTGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.31545741324921134No Hit
CAAGTGTAAGCCTGGAAGGGATTGTGTAGAACCATGTCGTCAGTGTAGGA10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCAGGCTTGTCCCCCCAGGTGTGAG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTAGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT10.31545741324921134No Hit
CAAGTGTAAGCCTAGGCAAACAAGGCCTGGCTTGTACCCCCAGGTGAGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGAGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAATGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCAGGCTTGTCCCCCAAGGAGTGAG10.31545741324921134No Hit
CAAGTGTAAGCCCGGCAAACAAGGCCTGGCTTGTCCCCCAGGTGTGTGTT10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGCGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTCTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCCTCCCAAAGTGCTGGGATTACATGCGTGAGCCA10.31545741324921134No Hit
TGTCACTCTCATCGCTGTCGTCAGTGTAGCACTAGGAGGCCTGGAAGGGA10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGTCCTGTCTTGTCCCCCCAGTTTAGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGCCAAACAAGGCCTGGCTAGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGCGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGCAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCACCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCATGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCGTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit
CAAGTGTAAGCCTCCGCAAACAAGGCCAGGCTTGTCCCCCCAGGTGTGTG10.31545741324921134No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)