FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008132319

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008132319
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences5368
Total Bases771.2 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC61

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG406375.68926974664679No Hit
TGTCCCTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG1061.9746646795827123No Hit
TGTCACTCTCATCCCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG280.5216095380029807No Hit
TGTCACTCTCATCGCTGTCGTGGCACCCCGGGAACAGCTTCCCCGCGCGG250.46572280178837555No Hit
TGTCATCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC230.4284649776453055No Hit
TGTACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC210.3912071535022355No Hit
TGTCACTCTCATCGCTGTCGTGGCGCACCGGGAACAGCTTCCCCGCGCGG210.3912071535022355No Hit
TGTCACTTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC190.35394932935916545No Hit
TGTCACCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC170.31669150521609535No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGA160.29806259314456035No Hit
TGTCACTCTATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC160.29806259314456035No Hit
TGTCCTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC160.29806259314456035No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCCTCCCCGCGCGG160.29806259314456035No Hit
TGTCACTCTCATCGCTGTCGTGACACACCGGGAACAGCTTCCCCGCGCGG150.27943368107302535No Hit
TGTCACTCTCATCGCTGTCGCGGCACACCGGGAACAGCTTCCCCGCGCGG150.27943368107302535No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTCCCCCGCGCGG140.26080476900149036No Hit
TGTCACTCTCTCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC140.26080476900149036No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGGACAGCTTCCCCGCGCGG130.24217585692995527No Hit
TTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC130.24217585692995527No Hit
TGTCACTCTCATCGCTGTCGTGGCACGCCGGGAACAGCTTCCCCGCGCGG120.22354694485842028No Hit
TGTCACTCTCACGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC110.20491803278688525No Hit
TGTCACTCTCATCGCTGTCGTGGCCCACCGGGAACAGCTTCCCCGCGCGG110.20491803278688525No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACGGCTTCCCCGCGCGG110.20491803278688525No Hit
TGTCACTCTCATCGTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC100.18628912071535023No Hit
CGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG90.1676602086438152No Hit
AGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG90.1676602086438152No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAACTTCCCCGCGCGG90.1676602086438152No Hit
TGCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC90.1676602086438152No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCATCCCCGCGCGG80.14903129657228018No Hit
TGTCACTCTCATCGCTGTCGAGGCACACCGGGAACAGCTTCCCCGCGCGG80.14903129657228018No Hit
TGTCACTCTCAACGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG80.14903129657228018No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCAGGAACAGCTTCCCCGCGCGG80.14903129657228018No Hit
TGTCACTCTCATCGCTGTCGTGGTACACCGGGAACAGCTTCCCCGCGCGG80.14903129657228018No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAGCAGCTTCCCCGCGCGG70.13040238450074518No Hit
TGTGACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCGGCGCGG70.13040238450074518No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCAG70.13040238450074518No Hit
TGTCACTCTCATCGCTGTCGTGGCACACTGGGAACAGCTTCCCCGCGCGG70.13040238450074518No Hit
TGTCACTCTCATGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC70.13040238450074518No Hit
TGACACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG70.13040238450074518No Hit
TGTCACTCTCATCGCTGCCGTGGCACACCGGGAACAGCTTCCCCGCGCGG70.13040238450074518No Hit
TGTCACTCTCATCGCTGTCGTAGCACACCGGGAACAGCTTCCCCGCGCGG70.13040238450074518No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGTGG60.11177347242921014No Hit
TGTCACTCTCATCGCTGTCGTGGCACACAGGGAACAGCTTCCCCGCGCGG60.11177347242921014No Hit
CAAGTGTAAGCCTCGGCAAAAAGGCAGCTGGAATCGACGAACAGGAAAAC60.11177347242921014No Hit
TGTCACTCTCAGCGCGGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG60.11177347242921014No Hit
TGTCACTCCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGGC60.11177347242921014No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCACGCGG60.11177347242921014No Hit
TGTCACTCTCATAGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG60.11177347242921014No Hit
TGTCACTCTCATCGCAGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG60.11177347242921014No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCTCGCGG60.11177347242921014No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAAGAGCTTCCCCGCGCGG60.11177347242921014No Hit
TGTCACTCGCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG60.11177347242921014No Hit
TGCCACTCTCATCGCTGTCGTGGCACACCGGGAACAGCTTCCCCGCGCGG60.11177347242921014No Hit
TGTCACTCTCATCGCTGTCGTGGCACACCGGGAACAGTTTCCCCGCGCGG60.11177347242921014No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)