FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008133128

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008133128
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences22
Total Bases3.1 kbp
Sequences flagged as poor quality0
Sequence length145
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG1881.81818181818183No Hit
CTTCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA14.545454545454546No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTGCTCCTCCGAGCTCCCAGCAGGG14.545454545454546No Hit
CTTCCAGGCCTCCTAGTGTTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG14.545454545454546No Hit
CTTCCAGGCCTCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA14.545454545454546No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)