FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008133263

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008133263
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences13
Total Bases1.8 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC56

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CAAGTGTAAGCCTCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG969.23076923076923No Hit
CAAGTGTAAGCCGCGGCAAACAAGACCTGGCTGGTACCCCCAGGAGTGTG17.6923076923076925No Hit
CAAGTCTAAGCCTCGGCAAACAAGGCCAGGCTTGTCCCCCCAGGTGTGTC17.6923076923076925No Hit
CAAGTGTAAGCCCGGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTGT17.6923076923076925No Hit
CAAGTGTAAGCCTCTGCAAACAAGGCCTGGCTTGTCCCCCCAGGTGTGTG17.6923076923076925No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)