FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008133326

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008133326
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences213
Total Bases30.8 kbp
Sequences flagged as poor quality0
Sequence length145
%GC60

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG18988.73239436619718No Hit
CTTCCAGGCCTCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA52.3474178403755865No Hit
CTTCCAGGCCTCCTAGTGTTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG20.9389671361502347No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCACCGAGCTCCCAGCAGGG20.9389671361502347No Hit
TGGGTCATGTGGTTCGGAGGCTTACACTGCAAGGAAGACCAAGTCTCTGC10.4694835680751174No Hit
CTTTCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.4694835680751174No Hit
CTTCCAGGTCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.4694835680751174No Hit
TTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.4694835680751174No Hit
CTTCCGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.4694835680751174No Hit
CTTCCAGGCCTCCTGTGCTCTAGGCAGCGACAACGAGCGACCAGCAGGGC10.4694835680751174No Hit
GTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCCAGCTCCCAGCAGGG10.4694835680751174No Hit
CTTCCAGGCCTCCTAGTGCTCTAAGCTCCTCCTCCGAGCTCCCAGCAGGG10.4694835680751174No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGTAGGG10.4694835680751174No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGGGCTCCCAGCAGGG10.4694835680751174No Hit
CTTCCAGGCCTCCTAGTACTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.4694835680751174No Hit
CTTCAGGCCTCCTAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.4694835680751174No Hit
CTTCCAGGCCTCCAGTGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGGA10.4694835680751174No Hit
CTTCCAGGCCTCCTAGTGCTCTAGGTTCCTCCTCCGAGCTCCCAGCAGGG10.4694835680751174No Hit
CTTCCAGGCCTCCTAATGCTCTAGGCTCCTCCTCCGAGCTCCCAGCAGGG10.4694835680751174No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)