FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008140679

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008140679
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences24
Total Bases3.4 kbp
Sequences flagged as poor quality0
Sequence length145
%GC62

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA1145.83333333333333No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA729.166666666666668No Hit
TGCTGATCATTGTTGCTTTGGGGGTTAGGGAAAATTATGGTTTTTTTCAC14.166666666666666No Hit
TGCTGATCATAGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA14.166666666666666No Hit
GCTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG14.166666666666666No Hit
TGCTGATCATTGTTGCTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG14.166666666666666No Hit
TGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAGTGTAGATCT14.166666666666666No Hit
TGCTGATCACTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA14.166666666666666No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)