FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008140799

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008140799
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences130
Total Bases18.8 kbp
Sequences flagged as poor quality0
Sequence length145
%GC62

[WARN]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGCTGATCATTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA6348.46153846153846No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA3325.384615384615383No Hit
TGCTGATCATTGTTGCTTTGGGGGTGAGGAAAAGTCTGGAGTATTTCCTC86.153846153846154No Hit
TGCTGATCACTGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA86.153846153846154No Hit
TGCTGATCATTGTTGATTCAAGTGCTTCACAGTGTAGAACATGTCGTCAG21.5384615384615385No Hit
TGCTGATCATTGTTGCTTCAAGAGCTTCACACTGTAGAACCATGTCGACA10.7692307692307693No Hit
TGCTGATCATTGTTGATTCAAGTGATTAACAGTGTAGAACAATGTCTTCA10.7692307692307693No Hit
TGCTGATCATTGTTGCTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG10.7692307692307693No Hit
TGCTGATCATTGTTGCTTCAAGTAATTCACAGTGTAGAACCATGTAGTCA10.7692307692307693No Hit
TGCTGATCTTGTTGATTCAAGTGCCTCACAGTGTAGAACCATGTCGTCAG10.7692307692307693No Hit
TGCTGATCATTGTTGCTTCAGTGCTTCACAGTGTAGAACCATGTCGTCAG10.7692307692307693No Hit
TGTTGATTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAGTGTAGATCT10.7692307692307693No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCACAGCGTAGAACCATGTCGTCA10.7692307692307693No Hit
TGCTGATCACTGTTGATTCAAGTGCTTCAGAGTGTAGAACCATGTCGTCA10.7692307692307693No Hit
TGCTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTGA10.7692307692307693No Hit
TGCTGATCTTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG10.7692307692307693No Hit
TGCTGATCACTGTTGATTAATGCTTCACAGTGTAGAACCATGTCGTCAGT10.7692307692307693No Hit
TGTTGATATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTCAG10.7692307692307693No Hit
TGTTGATCATTGTTGCTTCAAGTGCTTCACAGTGTAGAACCATGTCGTCA10.7692307692307693No Hit
TGCTGATCATTGTTGCTTCAATGCTTCACAGTGTAGAACCATGTCGTCAG10.7692307692307693No Hit
TGCTGATCATTGTTGCTTCAAGTCTTCACAGTGTAGAACCATGTCGTCAG10.7692307692307693No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)