FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008141184

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008141184
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences765
Total Bases110.9 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC57

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC60378.82352941176471No Hit
CGGAAACAACAACAGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC354.57516339869281No Hit
CGGAAACAACAACTGCTGCGAAGAGGAAGAACTGGAGACCAAGTCTCTGC334.313725490196078No Hit
CGGAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT111.4379084967320261No Hit
CGGAAACACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT40.522875816993464No Hit
CGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT40.522875816993464No Hit
CGGAAACAACAACTGCTGAGAAGAGAAGAACTGGAGACCAAGTCTCTGCT40.522875816993464No Hit
CGGAAACAACAACTACTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC30.39215686274509803No Hit
CGGAAAAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT30.39215686274509803No Hit
CGGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGA20.261437908496732No Hit
CGGAAACAACAACTGCTGAGAAGAGGGAGAACTGGAGACCAAGTCTCTGC20.261437908496732No Hit
CGGAAACAGCAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC20.261437908496732No Hit
CGGAACAACAACTGCTGAGAAGACGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACAACAACCGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
CGGAAACAACAACTGCTGCATGGCAGGATAGCAACTGGAGACCAAGTCTC10.130718954248366No Hit
CGGAAACAAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCTA10.130718954248366No Hit
CGTTAGTACAAGAGGGACAGCTGAGAAGAGGAAGAACTGGAGACCAAGTC10.130718954248366No Hit
CGGAAACAACAACAGCTCACAAGAGGAAGAACTCGAGACCAACTCTCTGC10.130718954248366No Hit
CGGAAACAACAACTTCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
CGGAAACAAAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGAGACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CCGAAACAACAACTGCTCAGAAGAGGAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACAACCACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
CGGAAACAACAGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCTAC10.130718954248366No Hit
CGGAATCAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
CGGAAACAACAACTGCTGGAGCATGGCAGGATAGCAACTGGAGACCAAGT10.130718954248366No Hit
ACAACAGGTCAGATGCAGGCATGAGTAGCGTGTGACGGGTGGGAATCCCG10.130718954248366No Hit
GGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CAGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAAAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAAAGAACTGGAGACCAAGTCTCTGCTA10.130718954248366No Hit
CGGAACAACAACTGCTGCGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
ACGGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTG10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAGGAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAGGGAACTGGAGACCAAGTCTCTGCTA10.130718954248366No Hit
CGGAAACAACAACTGCTGGGAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
CGGAAACAACACTGCTGCGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACAACAACTGCGGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
AGCACAGGACTCTTCTTTGGTTTGAAGATGAGCCAAACTGGAGACCAAGT10.130718954248366No Hit
CGGAAACAACAACTGCCGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
GGAAACAACAACTGCTGAGAAGAGGAGAACTGGAGACCAAGTCTCTGCTA10.130718954248366No Hit
CGGAAACAACAACTGCTGAAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAACAACACTGCTGCGAAGAGGAAGAACTGGAGACCAAGTCTCTGCTA10.130718954248366No Hit
CGGAAACACAACTGCTGCGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACACAACAGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGTTAGTGACAAGAGGGACAGCAGAGAAGAGGAAGAACTGGAGACCAAGT10.130718954248366No Hit
CGGAAACAACACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAACCAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
CGGAAACAACAACTGGAGCATGGCAGGATAGCAACTGGAGACCAAGTCTC10.130718954248366No Hit
CGGAAACAACAACTGCTGCCACTGACGACATGGTTCTACACCTCAACGGA10.130718954248366No Hit
CGAAACAACAACTGCTGAGAAGAGTAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAGAGAGAGCTCGAGACCAAGTCTCTCG10.130718954248366No Hit
CCGGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTG10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACAAAGTCTCTGC10.130718954248366No Hit
CGAAACAACAACAGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAGGAAGAACTTGAGACCAAGTCTCTGC10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAGGACAAAATGAGCCCAAGTCTCATCT10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAGGAAGAACAGCAGAACAAGACTAAGC10.130718954248366No Hit
CGGAACAACAACAGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAACAACAACTACTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACAACAACTGCTGAAAAGAGGAAGAACTGGAGACCAAGTCTCTGC10.130718954248366No Hit
ACAACAGCAGTTCCAGGGGTCTAACTGGAGACCAAGTCTCTGCTACCGTA10.130718954248366No Hit
CGGGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTG10.130718954248366No Hit
CGTTAGTGACAAGAGGAGCATGGCAGGATAGCAACTGGAGACCAAGTCTC10.130718954248366No Hit
CGTTAGTGACAAGAGGGACATCTGAGAAGAGGAAGAACTGGAGACCAAGT10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGGGAGAACTGGAGACCAAGTCTCTGCTA10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAGGAAAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACAACAACGCTGAGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGAGGAAGAACTGGAGACCAAGACTCTGC10.130718954248366No Hit
CGGAAACAACAACTGCTGAGAAGACGAAGAACTGGAGACCAAGACACTGC10.130718954248366No Hit
CGGAAACAAAACTGCTGCGAAGAGGAAGAACTGGAGACCAAGTCTCTGCT10.130718954248366No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)