FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008142630

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008142630
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences193
Total Bases27.9 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC65

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAACAGGTCAGATGCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGCGC12363.730569948186535No Hit
CGGAAACAACAACTGCTGAGAAGAGGAAGCTGTTCAGACCAAGTCTCTGC3518.134715025906736No Hit
CGGAAACAACAACAGCTGAGAAGAGGAAGCTGTTCAGACCAAGTCTCTGC42.072538860103627No Hit
ACAACGGTCAGATGCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGCGCT31.5544041450777202No Hit
ACAACAGGTCAATGCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGCGCT21.0362694300518136No Hit
CGTTAGTGACAAGAGGGACAGCTGAGAAGAGGAAGCTGTTCAGACCAAGT21.0362694300518136No Hit
ACAACAGGTCAGATCCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGCCC10.5181347150259068No Hit
ACAACAGGTCAGATGCAGGCCATCGGTGTCCCAAGCTCCCACCCAGCGCT10.5181347150259068No Hit
ACAACAGGTCAGATGCAGGCGCATCGGTGTCCCAAGCTCCCACCCAGCGC10.5181347150259068No Hit
CGTTAGTGACAAGAGGGACATCTTGTCACTAACCTGGAGCATGGCCTGGA10.5181347150259068No Hit
CGGAAACAACAGCAGCTGAGAAGAGGAAGCTGTTCAGACCAAGTCTCTGC10.5181347150259068No Hit
ACAACAGGTCAGATGCAGGCCCATCGGTGTCCCAAGCTCCCACCTAGCGC10.5181347150259068No Hit
CGAAACAACAACTGCTGAGAAGAGGAAGCTGTTCAGACCAAGTCTCTGCT10.5181347150259068No Hit
CGGAAACGACAACAGCTGAGAAGAGGAAGCTGTTCAGACCAAGTCTCTGC10.5181347150259068No Hit
ACAACAGGTCAGATGCAGGCCCACCGGTGTCCCAAGCTCCCACCCAGCGC10.5181347150259068No Hit
ACACAGGTCAGATGCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGCGCT10.5181347150259068No Hit
ACAACAGGTCAGATGCAGGCCCATCGGTGTCACAAGCTCCCACCCAGCGC10.5181347150259068No Hit
ACAACAGGTCAGATGCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGTGC10.5181347150259068No Hit
CGAAACAACAACAGCTGAGAAGAGGAAGCTGTTCAGACCAAGTCTCTGCT10.5181347150259068No Hit
CGGAAACAACAACTCTGAGAAGAGGAAGCTGTTCAGACCAAGTCTCTGCT10.5181347150259068No Hit
CGGAAACAACAACTGCTGCACTGCCTGCTCAACAAGAAGGTCGGGGCCTG10.5181347150259068No Hit
ACAACAGTCAGATGCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGCGCT10.5181347150259068No Hit
CGGAAACACAACTGCTGAGAAGAGGAAGCTGTTCAGACCAAGTCTCTGCT10.5181347150259068No Hit
ACAACAGGTCAGATGCAGGTCCATCGGTGTCCCAAGCTCCCACCCAGCGC10.5181347150259068No Hit
CGGAACAACAACTGCTGAGAAGAGGAAGCTGTTCAGACCAAGTCTCTGCT10.5181347150259068No Hit
CGGAAACAACAACTGCTCAGAACAGGAAGATGTTCAGACCAAGACTCTGC10.5181347150259068No Hit
ACAACAGGTCAGATGCAGGCCCATCGGTGCCCCAAGCTCCCACCCAGCGC10.5181347150259068No Hit
ACAAAGGTCAGATGCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGCGCT10.5181347150259068No Hit
ACACCAGGTCAGATGCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGCGC10.5181347150259068No Hit
ACAACAGGTCAGATGCAGGCCCATCGCTGTCCCAAGCTCCCACCCAGCGC10.5181347150259068No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)