FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008143816

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008143816
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1751
Total Bases253.8 kbp
Sequences flagged as poor quality0
Sequence length142-145
%GC58

[FAIL]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CGGAAACAACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC110963.335237007424325No Hit
CGGAAACAACAACTGCTGCGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC1548.794974300399772No Hit
CGGAAACAACAACAGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC1045.93946316390634No Hit
ACAACAGGTCAGATGCAGGCGCTGCCCATGGGAGCCCTGCCCCAGGGGCC382.1701884637350086No Hit
ACAACAGGTCAGATGCAGGCCCATCGGTGTCCCAAGCTCCCACCCAGCGC211.1993146773272416No Hit
ACAACAGGTCAGATGCACCTGGAAGGAGGGAAGTAGACCAAGTCTCTGCT191.0850942318675043No Hit
ACAACAGGTCAGAAGCACCTGGAAGGAGGGAAGTAGACCAAGTCTCTGCT160.9137635636778983No Hit
CGAAACAACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT140.799543118218161No Hit
CGGAACAACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT130.7424328954882925No Hit
GGAAACAACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT130.7424328954882925No Hit
CGGAAACACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT100.5711022272986864No Hit
CGGAAAAACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT90.5139920045688178No Hit
CGGAAACAACACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT70.3997715591090805No Hit
CGGAAACAACAACTGCTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTC60.34266133637921187No Hit
CGGAAACAACAATGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT50.2855511136493432No Hit
CGGAAACAACAACTGCTGAGAAGAGGAAGGAAGTAGACCAAGTCTCTGCT50.2855511136493432No Hit
CGGAAACAACAACTCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT50.2855511136493432No Hit
CGGAAACAACAACTGCTGAGAAGAGAAGGGAAGTAGACCAAGTCTCTGCT50.2855511136493432No Hit
CGGAAACAACAACTACTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC50.2855511136493432No Hit
CGGAAACAACAACTGCTGAGAAGGGAAGGGAAGTAGACCAAGTCTCTGCT40.2284408909194746No Hit
CGGAAACAACAACTGCCGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC40.2284408909194746No Hit
CGGAAACAACAACTGCTGAGAAAGGAAGGGAAGTAGACCAAGTCTCTGCT40.2284408909194746No Hit
CGGAACAACAACAGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT40.2284408909194746No Hit
CGGAAACAACAACCGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC40.2284408909194746No Hit
CGGAAACAACAACGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT30.17133066818960593No Hit
CGAAACAACAACTGCTGCGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT30.17133066818960593No Hit
ACAACAGGTCAGATGCAAAAGCACCTGGAAGGAGGGAAGTAGACCAAGTC30.17133066818960593No Hit
CGGAAACACAACTGCTGCGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT30.17133066818960593No Hit
CGGAAACAACAACTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCTAC30.17133066818960593No Hit
GGAAACAACAACTGCTGCGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT30.17133066818960593No Hit
CGGAAACAACAACTGCTGGGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC30.17133066818960593No Hit
CGGAAACAACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGACTCTGC30.17133066818960593No Hit
GGAACAACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCTA20.1142204454597373No Hit
CGGAAACAACAGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCTAC20.1142204454597373No Hit
CTGAAACAACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC20.1142204454597373No Hit
CGGAAACAAAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT20.1142204454597373No Hit
CGGAAACAACAACTGCTGAGAAAAGGAAGGGAAGTAGACCAAGTCTCTGC20.1142204454597373No Hit
CGGAAACAACACTGCTGCGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT20.1142204454597373No Hit
CGGAAACAACAACTGCTGAGAAGAGGTAGGGAAGTAGACCAAGTCTCTGC20.1142204454597373No Hit
CGGAAACACAACAGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT20.1142204454597373No Hit
CGGAAACAACAGCTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC20.1142204454597373No Hit
CGGAACAACAACTGCTGCGAAGAGGAAGGGAAGTAGACCAAGTCTCTGCT20.1142204454597373No Hit
CGGAAACAACAACTGCTGCGAAGAGGAAGGAAGTAGACCAAGTCTCTGCT20.1142204454597373No Hit
CGAAAACAACAACTGCTGAGAAGAGGAAGGGAAGTAGACCAAGTCTCTGC20.1142204454597373No Hit
CGGAAACAACAACTGCTGAGAAGAGGAATGGAAGTAGACCAAGTCTCTGC20.1142204454597373No Hit
CGGAAACAACAACTGCTGAGAAGAGGAACGGAAGTAGACCAAGTCTCTGC20.1142204454597373No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)