FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008148478

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008148478
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1051
Total Bases152.3 kbp
Sequences flagged as poor quality0
Sequence length141-145
%GC59

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
CTCCAAGTAACGGTGCTGTCACCCTTTGCCCGGCTAAAGACCAAGTCTCT13612.940057088487155No Hit
GTGCTGTCTCTCTTTTGGTTGGGCTAAAGACCAAGTCTCTGCTACCGTAA858.087535680304473No Hit
GTGCTGTCTCTCTTTGATGGTGCTGTCTCTCTTTGATGGTGCTGTCTCTC706.660323501427213No Hit
CTCCAAGTAACGGTGCTGCCACTGATAGGAGGCTAAAGACCAAGTCTCTG706.660323501427213No Hit
CTCCAAGTAACGGTGCGGCCACTGATAGGAGGCTAAAGACCAAGTCTCTG696.565176022835395No Hit
GCAAAAGTTCTCAGGGATGTCGGTGCCTCCTTCTCTTTTGGTTGGGCTAA686.470028544243577No Hit
GTGCTGTCTCTCTTTGATGGGCTAAAGACCAAGTCTCTGCTACCGTAACG575.423406279733587No Hit
CTCCAAGTAACGGTGCTGTCACTGATAGGAGGCTAAAGACCAAGTCTCTG514.8525214081826835No Hit
CTCCAAGTAACGGTGCTGTCTCTCTTTGCGGCCACTGATAGGAGGCTAAA423.9961941008563278No Hit
GTGCCTCCTTCTCTTTTGGTTGGGCTAAAGACCAAGTCTCTGCTACCGTA282.664129400570885No Hit
CTCCAAGTAACGGTGCTGTCTCTTCACCCTTTGCCCGGCTAAAGACCAAG131.236917221693625No Hit
GCAAAAGTTCTCAGGGATGTCCTCCTTCTCTTTTGGTTGGGCTAAAGACC131.236917221693625No Hit
GTGCTGTCTCTTTTGGTTGGGCTAAAGACCAAGTCTCTGCTACCGTAACG121.141769743101808No Hit
GTGCTGTCTCTCTTTGGTTGGGCTAAAGACCAAGTCTCTGCTACCGTAAC121.141769743101808No Hit
CTCCAAGTAACGGTGCTGTTTCTCTTCACCCTTTGCCCGGCTAAAGACCA121.141769743101808No Hit
CTCCAAGTAACGGTGCTGTCTCTCTTCACCCTTTGCCCGGCTAAAGACCA111.0466222645099905No Hit
GTGCTGTCTCTCTTTGATGGTGCTGTCTCTCTTTGATGGTGCCTCCTTCT100.9514747859181731No Hit
GCAAAAGTTCTCAGGGATGTGTGTGCCTCCTTCTCTTTTGGTTGGGCTAA90.8563273073263558No Hit
GTGCCTCCTCTCTTTTGGTTGGGCTAAAGACCAAGTCTCTGCTACCGTAA90.8563273073263558No Hit
GTGCTGTCTCTCTTTGATGGTGCCTCCTTCTCTTTTGGTTGGGCTAAAGA60.570884871550904No Hit
GTGCTGTCTCTCTTTGATGGACACTGACGACATGGTTCTACAGTCCAAGT50.47573739295908657No Hit
GGTGTTTGGGATGGAATGGTGCGGCCACTGATAGGAGGCTAAAGACCAAG40.3805899143672693No Hit
CTCCAGTAACGGTGCTGCCACTGATAGGAGGCTAAAGACCAAGTCTCTGC30.285442435775452No Hit
GCAAAAGTTCTCAGGGATGTGCCCAGTTGTATGATTGATGCGGCTAAAGA30.285442435775452No Hit
GCAAAAGTTCTCAGGGATGTCCCCAGTTGTATGATTGATGCGGCTAAAGA30.285442435775452No Hit
CTCCAAGTAACGGTGCTGTCTCCCTTTGCCCGGCTAAAGACCAAGTCTCT30.285442435775452No Hit
CTCCAAGTAACGGTGCTCTCACCCTTTGCCCGGCTAAAGACCAAGTCTCT30.285442435775452No Hit
GTGCTGTCTCTCTTTGATGGAATCTGGGCCGTGTCTCAGTCCCAGTGTGG30.285442435775452No Hit
GCAAAAGTTCTCAGGGATGTCCCTGTGATGATTGATGCGGCTAAAGACCA30.285442435775452No Hit
GCAAAAGTTCTCAGGGATGGCCTCCTTCTCTTTTGGTTGGGCTAAAGACC30.285442435775452No Hit
CTCCAAGTAACGGTGCTGTCTCTCACCCTTTGCCCGGCTAAAGACCAAGT30.285442435775452No Hit
GCAAAAGTTCTCAGGGATGTTGGTGCCTCCTTCTCTTTTGGTTGGGCTAA30.285442435775452No Hit
GTGCTGTCTCTCTTTGATTGGGCTAAAGACCAAGTCTCTGCTACCGTAAC30.285442435775452No Hit
CTCAAGTAACGGTGCGGCCACTGATAGGAGGCTAAAGACCAAGTCTCTGC30.285442435775452No Hit
GCAAAAGTTTCAGGGATGTCGGTGCCTCCTTCTCTTTTGGTTGGGCTAAA30.285442435775452No Hit
GTGCTGTCTCTCTTTGATGGCACTGACGACATGGTTCTACAGTCCAAGTG30.285442435775452No Hit
GCAAAAGTTCTCAGGGATGTGAGGACCACCCATGTACTCTGCGTTGATAC20.19029495718363465No Hit
CTCCAAGTAACGTGCTGTCTCTTCACCCTTTGCCCGGCTAAAGACCAAGT20.19029495718363465No Hit
CTCCAAGTACGGTGCTGTCACTGATAGGAGGCTAAAGACCAAGTCTCTGC20.19029495718363465No Hit
CTCCAAGTAACGGTGCGGCCACTGATGGAGGCTAAAGACCAAGTCTCTGC20.19029495718363465No Hit
CTCCAAGTAACGGTGCTGTCACCCTTTACCCGGCTAAAGACCAAGTCTCT20.19029495718363465No Hit
GTGCTGTCTCTCTTTGATGGACAGAATCCGCGATAGTTTGGCCCTCCGGT20.19029495718363465No Hit
GCAAAAGTTCTCAGGGATGTGATGATTGATGCGGCTAAAGACCAAGTCTC20.19029495718363465No Hit
GTGCTGTCTCTCTTTGATGGTGCTGTCTCTCTTTGATGGTGCTGTCTCTA20.19029495718363465No Hit
CCCAAGTAACGGTGCTGTCACCCTTTGCCCGGCTAAAGACCAAGTCTCTG20.19029495718363465No Hit
GTGCTGTCTCTCTTTGATGGAATCCTGACGACATGGTTCTACAGTCCAAG20.19029495718363465No Hit
GTGCTGTCTCTCTTTTGTTGGGCTAAAGACCAAGTCTCTGCTACCGTAAC20.19029495718363465No Hit
GTGCTGTCTCTCTTTTGGTGGGCTAAAGACCAAGTCTCTGCTACCGTAAC20.19029495718363465No Hit
CTCAAGTAACGGTGCTGTCACCCTTTGCCCGGCTAAAGACCAAGTCTCTG20.19029495718363465No Hit
CCCTGTGATGATTGATGCGGCTAAAGACCAAGTCTCTGCTACCGTAACGG20.19029495718363465No Hit
GCAAAAGTTCTCAGGGATGTCGGTGCCTCCTTCCTTTTGGTTGGGCTAAA20.19029495718363465No Hit
GTGCTGTCTCTCTTTGATGGCTAAAGACCAAGTCTCTGCTACCGTAACGG20.19029495718363465No Hit
GCAAAAGTTCTCAGGGATGTCCTGTGATGATTGATGCGGCTAAAGACCAA20.19029495718363465No Hit
GTGCTGCCTCTCTTTTGGTTGGGCTAAAGACCAAGTCTCTGCTACCGTAA20.19029495718363465No Hit
CTCCAAGTAACGGTGCTGTCACCTTTGCCCGGCTAAAGACCAAGTCTCTG20.19029495718363465No Hit
GCAAAAGTTCTCAGGGATGTCCACACTGACGACATGGTTCTACATAGAGG20.19029495718363465No Hit
GTGCTGTCTCTCTTTGATGCGGCTAAAGACCAAGTCTCTGCTACCGTAAC20.19029495718363465No Hit
GTGCTGTCTCTCTTTGATGGAATCGCCGTCTCTCAGCCTCCTTCTCTTTT20.19029495718363465No Hit
GTGCTGCCTCCTTCTCTTTTGGTTGGGCTAAAGACCAAGTCTCTGCTACC20.19029495718363465No Hit
GTGCTGTCTCTCTTTGATGGTGCTGTCTCTCTTTGATGGTGCTGTCTCGC20.19029495718363465No Hit
GCAAAAGTTCTCAGGGATGCCTCCTTCTCTTTTGGTTGGGCTAAAGACCA20.19029495718363465No Hit
CTCCAAGTAACGTGCGGCCACTGATAGGAGGCTAAAGACCAAGTCTCTGC20.19029495718363465No Hit
GTGCTGTCTCTCTTTGATGGAACACTGACGACATGGTTCTACAGTCCAAG20.19029495718363465No Hit
GTGCTGTCTCTCTTTGATGGTGCTGTCTCTCTTTGATGGTGCTGTCTATC20.19029495718363465No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)