FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008150755

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008150755
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences752
Total Bases109 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCT36949.069148936170215No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTGTGTGAAGACCAAGTCTC9913.164893617021276No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG9512.632978723404257No Hit
ACTTAAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAG334.388297872340425No Hit
ACTTAAAAACAAGGCAGTTCTGAACGGTATTTGTGTGAAGACCAAGTCTC162.127659574468085No Hit
ACTTAAAAACAAGGCAGTGCTATGCCCTCCCAGGTACCCCAAGCTGGCAG151.9946808510638299No Hit
ACTTAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC111.4627659574468086No Hit
ACTTAAAAACAAGGCAGTGCTGAACGGTATTTGTGTGAAGACCAAGTCTC91.196808510638298No Hit
TGTGTGTGTGTTTCTGTGGCAGCTCTGAACGGTATTTGTGTGAAGACCAA70.9308510638297872No Hit
ACTTAAAAACAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC60.7978723404255319No Hit
ACTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC40.5319148936170213No Hit
TGTGTGTGTGTTTCTGTTGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG30.39893617021276595No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGTCT30.39893617021276595No Hit
TGTGTGTGTGTTTCTGTGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC20.26595744680851063No Hit
ACTTAAAAACAAGGAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAGC20.26595744680851063No Hit
ACTTAAAAACAAGGCAGTGCTATCAACGAAGAGGTCCATTCTAGTGCCGT20.26595744680851063No Hit
ACTTAAAAACAAGGCAGTGTTAATGCCTAATGGTGCTACAGTTTCTGCCT20.26595744680851063No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCC20.26595744680851063No Hit
ACTTAAAAACAAGGCAGTGCTAATACCTAATGGTGCTACAGTTTCTGCCT20.26595744680851063No Hit
ACTTAAAAAAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC20.26595744680851063No Hit
CTTAAAAACAAGGCAGCTCTGAACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTACACTGAAGAATTGGTTATACAAACTGTA10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTCCTGAACGTTATTTGTGTGAAGACCAAGTATC10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCCAAAGCCTAATGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGATAAAGACTAATGTTGCTACAGTTTCTGCCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCGC10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTATCAACGAAGAGTCCATTCTAGTGCCGTG10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCCACAGTTTCTGCCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCAAAGCTGGCAG10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAAAGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
CAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTCTTC10.13297872340425532No Hit
ACTTAAAAACAATGCAGTGCTAATTCATAATGGTGCTACAGATTCTGCAT10.13297872340425532No Hit
TGTATGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.13297872340425532No Hit
ACTTAAAACAAGGCAGGCTAATGCCTAATGGTGCTACAGTTTCTGCCTCT10.13297872340425532No Hit
ACTTAAAAACAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAGC10.13297872340425532No Hit
ACTTAAAGACAAGGCAGCTCTGAACGGTATTTGTGTGAAGACCAAGTCTC10.13297872340425532No Hit
TGTGTGTGTGTTTCTGTGGGCTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.13297872340425532No Hit
ACTCAAAAACAAGGCAGCTCTGAACGGTATTTGTGTGAAGACCAAGTCTC10.13297872340425532No Hit
TGTTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.13297872340425532No Hit
ACTTAAAAACAAGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.13297872340425532No Hit
ACTTAAAAATAAGGCAGTGCTAATGCCTAATGGCGCTACAGTTTCTGCCT10.13297872340425532No Hit
ACTAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTAAAGGTTCTGACT10.13297872340425532No Hit
TGTGTGTGTGTTTCTGTGGGTGAGGTCCATTCTAGTGCCGTGTGAAGACC10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTATGCCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAGTGCCTAATGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
CTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.13297872340425532No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGAAAAG10.13297872340425532No Hit
ACTTTAAAAACAAGGCAGCTCTGAACGGTATTTGTGTGAAGACCAAGTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTTCTAATGCCTAATGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
ACTTAAAACCAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAG10.13297872340425532No Hit
ACTTAAAAACAAGACAGTGCTATCAACGAAGAGGTCCATTCTAGTGCCGT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAATGTCTAATGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGCTTGAACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTACTAATGCCTAATGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
TGTGTGTGTTTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.13297872340425532No Hit
ATTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.13297872340425532No Hit
TGTGTGTGGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.13297872340425532No Hit
TGTGTGTGTGTTTCTGTGGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAA10.13297872340425532No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGGCAGAAGGGTAAAG10.13297872340425532No Hit
ACTTAAAAAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTCT10.13297872340425532No Hit
ACTTAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAACGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
TGTGTGTGTGTTTCTGTTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAA10.13297872340425532No Hit
TGTGTGTGTGTTTCTGTGGGTGTCTTTAAGGTTTGGACAGAAGGGTAAAG10.13297872340425532No Hit
ACTTAAAAACAAGGCAGCTCTGAACTGTATTTGTGTGAAGACCAAGTCTC10.13297872340425532No Hit
ACTTAAAAACAAGGCAGCTCTAACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
ACTAAAAACAAGGCAGCTCTGAACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAAGGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
ACTTAAAAATAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATATGTGTGAAGAACAAGTCTC10.13297872340425532No Hit
ACTTAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAGC10.13297872340425532No Hit
ACTTAAAAACAAGGCATTGCTAATGCCTAATGGTGCTACAGTTTCTGCCT10.13297872340425532No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGATAGAAGGGTAAAG10.13297872340425532No Hit
ACTTAAAAACAAGGCAGCTCTGACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCATGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.13297872340425532No Hit
TGTGTGTGTGAAGACCAAGTCTCTGCTACCGTATCGAGGTACTATCTCGT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGCCTGAACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGGTATCAACGAAGAGGTCCATTCTAGTGCCGT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTCTGAACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTATCAGCCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGTTCTAACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
ACTTAAAAACAAGGCAGCTCTGATCGGTATTTGTGTGAAGACCAAGTCTC10.13297872340425532No Hit
ACTTAAAACAAGGCAGCTCTGAACGGTATTTGTGTGAAGACCAAGTCTCT10.13297872340425532No Hit
TGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGCT10.13297872340425532No Hit
TGTGTGTGTGTTTCTGTGTGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.13297872340425532No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)