FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008150792

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008150792
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences1952
Total Bases282.9 kbp
Sequences flagged as poor quality0
Sequence length141-145
%GC42

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC36618.75No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC27013.831967213114755No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC26213.422131147540984No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTACCGAATGTAGAACCATG24712.653688524590164No Hit
GGCACTAGAATGGACCTCTTCTTCATCACTAAATTATTTCAATTAAATAC19710.092213114754097No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATAC934.764344262295082No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTACCGAATGTAGAACCATG542.7663934426229506No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACT271.3831967213114753No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTACAAATTGCTGCTGGAACC130.665983606557377No Hit
AAATACCGTTCAGAGCTGCCACAGAAACACACACACAACCGAATGTAGAA110.5635245901639344No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTACCGAATGTAGAACCATG100.5122950819672131No Hit
GGCACTAGATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA100.5122950819672131No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCATAGCACT90.4610655737704918No Hit
GGCACTGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA80.4098360655737705No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTAAGTACCGAATGTAGAACCATGT80.4098360655737705No Hit
AAATACCGTCAGAGCTGCCTTGTTTTTAAGTACCGAATGTAGAACCATGT70.35860655737704916No Hit
AAATACCGTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT50.25614754098360654No Hit
GGCCTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA50.25614754098360654No Hit
AAATACCGTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT50.25614754098360654No Hit
GGACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA50.25614754098360654No Hit
GGCACTAGATGGACCTCTTCTTCATCACTAAATTATTTCAATTAAATACA50.25614754098360654No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGACCC50.25614754098360654No Hit
GGCACTGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA40.20491803278688525No Hit
AAATACCGTTAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT40.20491803278688525No Hit
AATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT40.20491803278688525No Hit
GGCACTAGAATGGACCTCTTCGTTGATAGCACTGCCTTGTTTTTAAGTAC40.20491803278688525No Hit
AAAACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT30.15368852459016394No Hit
GGCACTAGAAGGACCTCTTCTTCATCACTAAATTATTTCAATTAAATACA30.15368852459016394No Hit
GGCACTAGAAGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA30.15368852459016394No Hit
AAATACCGTTCAGAGCTGCCCCCAGGAGCTTGCAAATTGCTGCTGGAACC30.15368852459016394No Hit
GGCACTAGAATGGACCCACAGAAACACACACACAACCGAATGTAGAACCA30.15368852459016394No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATCGCTGCTGGAACC30.15368852459016394No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGACCC30.15368852459016394No Hit
GCACTAGAATGGACCTCTTCTTCATCACTAAATTATTTCAATTAAATACA30.15368852459016394No Hit
GGCACTAGAATGGACCCTTCCTCATCACTAAATTATTTCAATTAAATACA30.15368852459016394No Hit
AATACCGTTCAGAGCTGCCTTGTTTTTAAGTACCGAATGTAGAACCATGT30.15368852459016394No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGATGCTGGAACC20.10245901639344263No Hit
AAATACGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCTTGTTTAAGTACCGAATGTAGAACCATGTC20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTACCGAATGTTGAACCATG20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTACTGCTGGAACC20.10245901639344263No Hit
AAATACCGTTCGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.10245901639344263No Hit
AAATACCGTTAGAGCTGCCTTGTTTTTAAGTACCGAATGTAGAACCATGT20.10245901639344263No Hit
GGCACTAAATGGACCTCTTCTTCATCACTAAATTATTTCAATTAAATACA20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCGCCAAGAGCTTGCAAATTGCTGCTGGAACC20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGATTGCAAATTGCTGCTGGAACC20.10245901639344263No Hit
AAATACCGTTCAGACTGCCTTGTTTTTAAGTACCGAATGTAGAACCATGT20.10245901639344263No Hit
AATACCGTTCAGAACTGCCTTGTTTTTAAGTACCGAATGTAGAACCATGT20.10245901639344263No Hit
AAATACCGTTCAGCGCTGCCTTGTTTTTAAGTACCGAATGTAGAACCATG20.10245901639344263No Hit
AATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCCGCTGGAACC20.10245901639344263No Hit
AAATACCTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.10245901639344263No Hit
GGCATAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAGCC20.10245901639344263No Hit
AAATACCGTTCAAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.10245901639344263No Hit
AAATACGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACTG20.10245901639344263No Hit
GGCACTAGAATGGACTCTTCCTCATCACTAAATTATTTCAATTAAATACA20.10245901639344263No Hit
AAATACCGTTCAGGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.10245901639344263No Hit
AAATACCGTTCAGAACTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAGGTACCGAATGTAGAACCATG20.10245901639344263No Hit
GGCACTAGAATGGACCTCTTCCTCATCACGAAATTATTTCAATTAAATAC20.10245901639344263No Hit
GCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA20.10245901639344263No Hit
AAATACCGTTCGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.10245901639344263No Hit
GGCACTAGAATGGACCTCTTCCTCATAACTAAATTATTTCAATTAAATAC20.10245901639344263No Hit
GGCACAGAATGGACCTCTTCTTCATCACTAAATTATTTCAATTAAATACA20.10245901639344263No Hit
GGCACTAAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA20.10245901639344263No Hit
AAATACCGTTCAGCACTGCCTGTTTTTAAGTACCGAATGTAGAACCATGT20.10245901639344263No Hit
GGCACCAGAATGGACCTCTTCTTCATCACTAAATTACTTCAATTAAATAC20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCCGCTGGAACC20.10245901639344263No Hit
AAATACCGTTCAGAGTTGCCTTGTTTTTAAGTACCGAATGTAGAACCATG20.10245901639344263No Hit
AAATACCGTTCAGAGTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.10245901639344263No Hit
AAATACCGTTCAGAGCCGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC20.10245901639344263No Hit
AAAACCGTTCAGAACTGCCTTGTTTTTAAGTACCGAATGTAGAACCATGT20.10245901639344263No Hit
AAATACCGTTCAGGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.10245901639344263No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTCGCAAATTGCTGCTGGAACC20.10245901639344263No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)