FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151260

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151260
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences697
Total Bases101 kbp
Sequences flagged as poor quality0
Sequence length145
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC22732.568149210903876No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC16623.81635581061693No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG11816.929698708751793No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG395.5954088952654235No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACT172.4390243902439024No Hit
AATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT50.7173601147776184No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG50.7173601147776184No Hit
AAATACGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT40.5738880918220948No Hit
AAATACCGTTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAAC40.5738880918220948No Hit
AAATACCGTTCAGAGATGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC30.430416068866571No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTAGCAAATTGCTGCTGGAACC30.430416068866571No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGTTGCTGGAACC30.430416068866571No Hit
AATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT30.430416068866571No Hit
AAATACCTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.2869440459110474No Hit
AAATACCGTTCAGACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT20.2869440459110474No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCCGGAACC20.2869440459110474No Hit
AAATACCGTTAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.2869440459110474No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAGATTGCTGCTGGAACC20.2869440459110474No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGACCC20.2869440459110474No Hit
AAATACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.2869440459110474No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCAGCTGGAACC20.2869440459110474No Hit
AAATACCGTTAAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCTTATTTTTAAGTAAGACGTGTAGAACCATG10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATCGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAGCC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTACAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGACCC10.1434720229555237No Hit
AAATACCGTCAGAGCTGACACCAATAGCTTGCAAATTGCTGCTGGAAACT10.1434720229555237No Hit
AAATCCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCCGCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATACCGTTCAGAGCAGCCACAAGGAGCTTGCAAAATTCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCGCCTCCAAGAGCTTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACA10.1434720229555237No Hit
AAAAACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGATTGCAAATTCATGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAAATGCTGCTGGAACC10.1434720229555237No Hit
AAATCCGTTCAGAGCTGCAACCAGGAGCTTGCAAATTGCTCCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAATAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCAACCAGGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCTGAAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGAAGTGTAGAACCATG10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACTAGGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTCGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCCCCAAGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACAGTTCAGAGCTGCCACCAAGATCTTGCAAATTGCTGATGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAGTTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGTACCATG10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCAACCAAGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTATAGAACCATGT10.1434720229555237No Hit
AATACGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCTG10.1434720229555237No Hit
GGCACTAGAATGGACCTCTGCGTTGATACCACTGCTTCCCATGTACTCTG10.1434720229555237Clontech Universal Primer Mix Long (95% over 23bp)
AAATACCGTTAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATCCCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG10.1434720229555237No Hit
AAATAACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGAAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGACACCAGGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCAC10.1434720229555237No Hit
AAATACGTTCAGAGCTGCCACCAAGAGCCTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGAACTGCCTTTTTTTAAGTAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCTACCAAGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTCAGGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCTG10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGTTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTTCCACCAAGCGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTTTCAGAGCTGCCACCAGGCGCTTGCAAATTGCTGCTGGAA10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCGAGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCTCCAGGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGACTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGAACT10.1434720229555237No Hit
AAATACCGTTAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATCCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGAACTGCAGTGTTTTTAAGTAAGACGTGTAGAACCATG10.1434720229555237No Hit
AAATACCGTTCAAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAAACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCTG10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAATTTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAAC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATACCGTTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCAT10.1434720229555237No Hit
AATTACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATACCGTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTTGAACC10.1434720229555237No Hit
AAATCCCGTTAAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCATAGCACT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAACTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAAGTGCTGATGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGGACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGGGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
GGCACTAGAATGGACCTCTTCGTTGATACCACTGCCTTGTTTTTAAGTAA10.1434720229555237No Hit
AATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACTG10.1434720229555237No Hit
AAATACCGTTCAAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAACACTG10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAACTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATACCGTTCAGAGCCGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG10.1434720229555237No Hit
AAATACCGTTCAGAACTGCCTTGTTTTAAGTAAGACGTGTAGAACCATGT10.1434720229555237No Hit
AAATACCGTTCAGAGCTCCCACCAGTAGCTTGCAAATTGCAGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGACTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATACCGGTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTTAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACT10.1434720229555237No Hit
AAATACCGTTCGAGCTGCCACCAAGAGTTTGCAAATTGCTGCTGGAACCT10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTTCAAATTGCTGCTGGAACC10.1434720229555237No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCCTGCAAATTGCTGCTGGAACC10.1434720229555237No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)