FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151304

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151304
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences605
Total Bases87.7 kbp
Sequences flagged as poor quality0
Sequence length143-145
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC15024.793388429752067No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG12320.330578512396695No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC8213.553719008264462No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC487.933884297520661No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATAC437.107438016528926No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG437.107438016528926No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACT71.1570247933884297No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG71.1570247933884297No Hit
AAATACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT40.6611570247933884No Hit
AATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT30.49586776859504134No Hit
AAATACCGTTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAAC30.49586776859504134No Hit
AAATACGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT30.49586776859504134No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAATAAGACGTGTAGAACCATGT20.3305785123966942No Hit
AAATACGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.3305785123966942No Hit
GGCACTAGATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA20.3305785123966942No Hit
AATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.3305785123966942No Hit
AAATACCGTTCGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.3305785123966942No Hit
AAATACCGTTAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.3305785123966942No Hit
AAACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCTG10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGATGCTCGAACC10.1652892561983471No Hit
AAATACCGTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.1652892561983471No Hit
TGCACTACAATGGACCACTTCCTAATAAATAAATTATTTCAATTAAATAA10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAGCC10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCTCCATGAGCTTGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAGTAAGACGTGTAGAACCATGT10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCGAATTGCTGCTGGAACC10.1652892561983471No Hit
GGCCTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA10.1652892561983471No Hit
AAATACCGTTCAGAGCAGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
AAATCCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.1652892561983471No Hit
AAATACCGTTCGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGGTGCTGGAACC10.1652892561983471No Hit
AAATACCGTTAGCACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1652892561983471No Hit
AAATACCGTTCAGAACTGCCATGTTTTTAAGTAAGACGTGTAGAACCATG10.1652892561983471No Hit
GGCACTAGAATGGACCTCTTTCTCATCACTACATTATTTCAATTAAATAC10.1652892561983471No Hit
AATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1652892561983471No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTATAGAACCATG10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTACTGGAACC10.1652892561983471No Hit
AAATACCGTTCATAGCTGCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.1652892561983471No Hit
GGCACTAGAATGGACCTCTTTCTCATCACTACATTATTTCAATTTAATAC10.1652892561983471No Hit
AAATACCGTTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCAT10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTAAGTAAGACGTGTAGAACCATGT10.1652892561983471No Hit
AAATACCGTTCAGTGCTGCCCCCAAGAGCTTGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGTAACC10.1652892561983471No Hit
AAATACCGTTAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTAGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
AAATACCGTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.1652892561983471No Hit
GGCACAGAATGGACTCTTCCTCATCACTACATTATTTCAATTAAATACAA10.1652892561983471No Hit
GGCACTAGAAGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAAA10.1652892561983471No Hit
AAATACCGTTCAGAGCTGACACCAGGAGCTTGCAAATTGCTGCTGGCACC10.1652892561983471No Hit
GGCACTAGAATGGACCTCTTCCTCATCCCTACATTATTTCAATTAAATAC10.1652892561983471No Hit
GGCACTAGAATGGACCTCTTCGTTGATACCACTGCTTCCATGTACTCTGC10.1652892561983471Clontech SMARTer II A Oligonucleotide (95% over 22bp)
GGCACTAGAATGGACCTCTTCGTTGATAGCACTGCCTTGTTTTTAAGTAA10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACGATG10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGTAAATTGCTGCTGGGACC10.1652892561983471No Hit
GGCATAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA10.1652892561983471No Hit
AAATACGTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGTC10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCGTGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
AAATACCTTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAAACATG10.1652892561983471No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACAATG10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGATGCTGGAACC10.1652892561983471No Hit
AATACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCTG10.1652892561983471No Hit
AAATACCGTTCAGAGCTGTCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
GGCACTAGAATGGACCTCTTCCTCATCAATACATTATTTCAATTAAATAC10.1652892561983471No Hit
GGCACTAAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTCGAACC10.1652892561983471No Hit
AATACCGTTCAGAACTGCCTTGTTTTAAGTAAGACGTGTAGAACCATGTC10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTCCTGCTGGAACC10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTACTGCTGGAACC10.1652892561983471No Hit
GGACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA10.1652892561983471No Hit
AAATACGGTTCAGAGCTGCCACCAAGAGCTTGCAAAATGCTGCTGGAACC10.1652892561983471No Hit
AAATACCGTGCCGAGCTGCAACCAGGAGCTTGAAAATTGCGGCTGTAACC10.1652892561983471No Hit
GGACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA10.1652892561983471No Hit
AAATACCGTTCAGAGCTCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.1652892561983471No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATT10.1652892561983471No Hit
AAATACCGTTCAGAGCCGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG10.1652892561983471No Hit
AAATACCGTTCAGAACTGCCTTGTTTTAAGTAAGACGTGTAGAACCATGT10.1652892561983471No Hit
ATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCTG10.1652892561983471No Hit
AAATACCGTTCAGAGTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAGAAGCTTGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
GGCACTAGAATGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA10.1652892561983471No Hit
AAATACCGTTCAGAGCGGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
GGCATAGATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACAA10.1652892561983471No Hit
GGCACTAGAATGGACCACTTCCTCATCACTACATTATTTCAAATAAATAC10.1652892561983471No Hit
AAATACGTTCAGCACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.1652892561983471No Hit
AAATACCGTTCAGAGCTGACACCAGGAGCTTGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
AAATACCGTTCAGACTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.1652892561983471No Hit
AAATACCGTTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCAC10.1652892561983471No Hit
AAATACCGTTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCAT10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAGTAGCTTGCAAATTGCTGCTGGAACC10.1652892561983471No Hit
AAATACCATTCAGAGCAGCCACCAAGAGCGTGCAAATTGCAGCTGGAACC10.1652892561983471No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACACTATTTCAATTAAATAC10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTCCTGCTGGAACC10.1652892561983471No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTATAACCATG10.1652892561983471No Hit
AAATACCGTAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCTG10.1652892561983471No Hit
AAAAACCGTTCAGAGCTGCCACCAGGAGATTGAAAATTGCTGCTGGAACC10.1652892561983471No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)