FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151340

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151340
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences609
Total Bases88.2 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC15926.108374384236456No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC12821.01806239737274No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG9014.77832512315271No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC579.35960591133005No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG335.41871921182266No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATAC111.8062397372742198No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACT40.6568144499178982No Hit
AAAACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT30.49261083743842365No Hit
GGCACTAGAATGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA30.49261083743842365No Hit
GGCATAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA30.49261083743842365No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG30.49261083743842365No Hit
AAATACCGTTCAGAGTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.3284072249589491No Hit
AAATACCGTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.3284072249589491No Hit
GCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA20.3284072249589491No Hit
AAATACCGTTCAGAGCAGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC20.3284072249589491No Hit
AAATCCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.3284072249589491No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAATTATTACAATTAAATAC20.3284072249589491No Hit
GGCACTAGAATGGACTTCTTCCTCATCACTAAATTATTTCAATTAAATAC20.3284072249589491No Hit
GGACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA20.3284072249589491No Hit
AAATACCGTTAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.3284072249589491No Hit
GGCACTAGATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA20.3284072249589491No Hit
GGCACTAGAATGGACCTCTTCGTTGATAGCACTGCCTTGTTTTTAAGTAA20.3284072249589491No Hit
GGCACTAGAATGGACCTCTTCCCCATCACTAAATTATTTCAATTAAATAC20.3284072249589491No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCCGGAACC20.3284072249589491No Hit
GGCACTAGAATGGACCTCTTTCTCATCACTAAATTATTTCAATTAAATAC20.3284072249589491No Hit
GGCCTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGCACCATG10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGATCTTGTAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATACCGTTCGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
GGCACTAGAGTGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC10.16420361247947454No Hit
AAATACCGTTCGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
AAATAGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCTG10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACAGAAACACACACACAAAGACGTGTAGAA10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCTTGATTTTAAGTAAGACGTGTATAACCATG10.16420361247947454No Hit
GGCACTAGAATTGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCTTGATTTTAAGTAAGACGTGTAGAACCATG10.16420361247947454No Hit
AAATACCGTTCAGAGGTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCTCCAAGAGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAATTATTACAATTAAATAA10.16420361247947454No Hit
AAATACCGTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTAGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
GGCACTAGAATGGACCTCTTTGACAAACCCAAGAAACACACACACAAAGA10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAATC10.16420361247947454No Hit
GGCACTAGAATGGACCTCTTCCTCACCACTAAATTATTTCAATTAAATAC10.16420361247947454No Hit
AAATACCGTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGATGGAACC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACG10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCCCCAAGAGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
GGCACTAAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA10.16420361247947454No Hit
GGCACTAAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA10.16420361247947454No Hit
AAATACCGTTCAGACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
AAAACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.16420361247947454No Hit
GGACTAGAATGGACCTCTTAATCATCACTAAATTATTTCAATTAAATACA10.16420361247947454No Hit
AAATACCGTTCGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.16420361247947454No Hit
GGCACTAGAATGGACCTCTTCCTCAACACTAAATTATTTCAATTAAATAC10.16420361247947454No Hit
AAATACCTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGTTGGAACCT10.16420361247947454No Hit
GGCACTAGAATGGACCTCTTCATCATCACTAAATTATTTCAATTAAATAC10.16420361247947454No Hit
GGCACAAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGATCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATACAGTTCAGATCTGCCTTGTTTTTAAGTAAGACGTGTAGAAACATG10.16420361247947454No Hit
AAATACCGTTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCAT10.16420361247947454No Hit
GGCACTAGAAGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA10.16420361247947454No Hit
AAATACCGTTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAAC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCCAT10.16420361247947454No Hit
AAATACCATTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG10.16420361247947454No Hit
AAATACCGCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACTGC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGCGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATACAGAGCTGTCACCAAGAGCTTGCAAATTGCTGCTGGAACCTGAAC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCTAATTGCTGCATGAACC10.16420361247947454No Hit
GGCACTAGAATGGACCTCTTCCTCATTACTAAATTATTTCAATTAAATAC10.16420361247947454No Hit
AAATACCGTTCAGAGCGCCAGCTTGGGGTACCTGGGAGGGCATAGCACTG10.16420361247947454No Hit
GGCACTAGAATGGACCCTTCCTCATCACTACATTATTTCAATTAAATACA10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCTTGTTCTTAAGTAAGACGTGTAGAACCATG10.16420361247947454No Hit
AAATACCGTTCAGAGCTCCCACCAAGAGCTTGCAAATTGCTGCTGCAACC10.16420361247947454No Hit
GGCACTAGAAGGACCTCTTCCTCATCACTACATTATTTTAATTAAATACA10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAATAGATTGCAAATAGCTGCTGGAACC10.16420361247947454No Hit
AATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
AAATACCGTTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAAC10.16420361247947454No Hit
AAAAACCGTTAAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTACTGGAACC10.16420361247947454No Hit
AAATACCGTTAAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATACCTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
AAATACCGTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.16420361247947454No Hit
AATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.16420361247947454No Hit
AAATACCGCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCTG10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCATAGCACT10.16420361247947454No Hit
GAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTACAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATACCGTTCAGAGCGCCGCCAAGAGCTTGCAAATTGCTGCTGGAACCT10.16420361247947454No Hit
AAATACCGTTCAGAGTTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATCCGTTCTGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.16420361247947454No Hit
AATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.16420361247947454No Hit
AAATACCGTTCAGAGCCGCCAGCAAGAGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
GGCACTAGAATGGACCTCTTCGTTGATACCACTGCCTTGTTTTTAAGTAA10.16420361247947454No Hit
AAATACCTTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
AATACCGTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCTG10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAGGAACTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.16420361247947454No Hit
AAATACCGTTAAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGACCCATG10.16420361247947454No Hit
AAATACCGTTCAGAACTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCTGGTTTTTAAGTAAGACCTGTAGAACGATG10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGGGCTTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
AAATACCGTTAGAGCTGCCACCAAGAGCTAGCAAATTGCTGCTGGAAACT10.16420361247947454No Hit
GGCACTAGAATGGAACTATACCTCATAACTAAATTATTTAAATTAAATAC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAACTGCTGCTGGAAAC10.16420361247947454No Hit
AAATACGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
AAATACCGTTCAGCACTGCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGATTGCAAATTGATGCTGGAACC10.16420361247947454No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCCTGCAAATTGCTGCTGGAACC10.16420361247947454No Hit
GGCACTAGAATCGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC10.16420361247947454No Hit
AAATACCGTTCAGAGCTTCCACCAGGAGCTTGCAAAAAGCTGCTGGAACC10.16420361247947454No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)