FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151372

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151372
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences448
Total Bases64.9 kbp
Sequences flagged as poor quality0
Sequence length141-145
%GC45

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC12427.67857142857143No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATAC8218.303571428571427No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG7115.848214285714285No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC419.151785714285714No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG265.803571428571429No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG61.3392857142857142No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACT51.1160714285714286No Hit
GGCACTAGATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA40.8928571428571428No Hit
AAATACCGTTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAAC30.6696428571428571No Hit
GGCATAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA30.6696428571428571No Hit
GGCACTAGAATGGACTCTTCCTCATCACTACATTATTTCAATTAAATACA30.6696428571428571No Hit
AAATACCGTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.4464285714285714No Hit
AAATACCGTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT20.4464285714285714No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACATGT20.4464285714285714No Hit
AAATACGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.4464285714285714No Hit
AAAACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.4464285714285714No Hit
GGCACTAGAAGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA20.4464285714285714No Hit
AAATACGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT20.4464285714285714No Hit
AAATACCGTTAAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.2232142857142857No Hit
GCACTAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACAAT10.2232142857142857No Hit
AAATACCGTTCAGAGTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AAATACCGTTCGGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.2232142857142857No Hit
AACTACCGTTCAGAGCAGCCACCAAGAGCTAGCAAATTCCAGCTGGAACC10.2232142857142857No Hit
GGCACTAGAATGGACCCCTGCCTCATCACTACATTATTTCAATTAAATAC10.2232142857142857No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAGTAAGACGTGTAGAACCATGT10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCCTGCAAATTACTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAGTAAGACGTGTAGAACCATGT10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTACAAATTGCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCAGAAACACACACACAAAGACGTGTAGAACC10.2232142857142857No Hit
AAATACCTTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.2232142857142857No Hit
GGCCTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA10.2232142857142857No Hit
AAATCCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AAATACCGTTAGCACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.2232142857142857No Hit
GGCACTAGAATGGACCTCTTCCTCACCACTACATTATTTCAATTAAATAC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTCCTGGAACC10.2232142857142857No Hit
AATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.2232142857142857No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTAATTCAATTAAATAC10.2232142857142857No Hit
AAATCCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.2232142857142857No Hit
TACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCTGA10.2232142857142857No Hit
GGACGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACAAT10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCTTCTTTTTAAGTAAGACGTGTAGAGGCATG10.2232142857142857No Hit
AAATACCTTTCAGAGCTGCCACCAGGAGCTTTCAAATTGCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAGTTGCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTAGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCAGCTGGAACC10.2232142857142857No Hit
AAATACCGTTAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGAAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AAATACCGTTCGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
GGCACTAGAATGGACCTCTTACTCATCACTACATTATTTCAATTAAATAC10.2232142857142857No Hit
AAATACCTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGATCTTGCAAATTTCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACTG10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGATGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGTCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCGTG10.2232142857142857No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC10.2232142857142857No Hit
AAATACAATAAAGACCAGCCACAAACAGCAAGAAAATTGCAGCAGCAACA10.2232142857142857No Hit
AAATACCGTTCAGACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.2232142857142857No Hit
AAATACCGTTCAGAGCGCCACCAGGAGCTTACAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGCGCTTGCAAATTGCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTCGCAAATTGCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCTGGAGCTTGCAAATTGCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACGAAACACACACACAAAGACGTGTAGAAC10.2232142857142857No Hit
GGACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA10.2232142857142857No Hit
AGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATAC10.2232142857142857No Hit
AAATACCGTTCGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AAATACCGTTTAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTTCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGCAAGACGTGTAGAACCATG10.2232142857142857No Hit
AAATACCGTTAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AAATACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.2232142857142857No Hit
AAATACCGTTCAGAGCCGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG10.2232142857142857No Hit
AAATACCGTTCAGAACTGCCTGTTTTTAAGTAAGACGTGTAGAACCATGT10.2232142857142857No Hit
GGCACTAGAATGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA10.2232142857142857No Hit
GGCACTAGAATGGACCTCTTCCTCATCACGACATTATTTCAATTAAATAC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCTTGTTTATAAGTAAGACGTGTAGAACCATG10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGTTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGATTGCAAATTGCTGCTGGAACC10.2232142857142857No Hit
AAATACCGTTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAAC10.2232142857142857No Hit
AAATACCGTTCAAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGACCCT10.2232142857142857No Hit
GGCACTAGAATGGACCTCTTCCACATCACTACATTATTTCAATTAAAAAC10.2232142857142857No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGTTGGAACC10.2232142857142857No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)