FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151387

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151387
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences801
Total Bases116.1 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG18523.096129837702872No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC15619.475655430711612No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTC14317.852684144818976No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCT12014.981273408239701No Hit
ACTTAAAAACAAGGCAGTTCTGAACGGTATTTTTCGTGAGACCAAGTCTC506.242197253433209No Hit
ACTTAAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAG161.9975031210986267No Hit
ACTTAAAAACAAGGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTC141.7478152309612984No Hit
ACTTAAAAACAAGGCAGTTCTGAACGGTATTTTCGTGAGACCAAGTCTCT30.37453183520599254No Hit
ACTTAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC30.37453183520599254No Hit
ACTTAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT30.37453183520599254No Hit
TGTGTGGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC30.37453183520599254No Hit
TGTGTGTGTGTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC30.37453183520599254No Hit
ACTTAAAAACAAGGCAGCTTGAACGGTATTTTTCGTGAGACCAAGTCTCT30.37453183520599254No Hit
GTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC30.37453183520599254No Hit
TGTGTGTGTGTCTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG20.24968789013732834No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTCGTGAGACCAAGTCTCT20.24968789013732834No Hit
ACTTAAAAACAAGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC20.24968789013732834No Hit
ACTTAAAAACAAGGCAGTTCTGAACGATATTTTTCGTGAGACCAAGTCTC20.24968789013732834No Hit
ACTTAAAAACAAGGCAGTGCTATGCCCTCCCAGGTACCCCAAGCTGGCAG20.24968789013732834No Hit
ACTTAAAAAAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT20.24968789013732834No Hit
ACTTAAAAACAAGGCAGCTCTGAACGCTATTTTTCGTGAGACCAAGTCTC20.24968789013732834No Hit
TGTGTGTGTGTTTTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC20.24968789013732834No Hit
ATTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC20.24968789013732834No Hit
ACTTAAAAACAAGGAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC20.24968789013732834No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGCGCTACAGTTTCTGCCTC10.12484394506866417No Hit
ACTTAAAAAAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGCTCTGAACGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAGTGGTGCTAGAGTTTCTGCCTC10.12484394506866417No Hit
ACTTAAAAACAAGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGGCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTCCTGAACGGTATTTTTCGTGAGACCAAGTCTC10.12484394506866417No Hit
TTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGCTTCTGCCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTTCTTGAGACAAAGTAGG10.12484394506866417No Hit
ACTTAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTATCAACGCAGAGTTGCTAAGAGGTCCATT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGTCT10.12484394506866417No Hit
ACTCAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC10.12484394506866417No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAGAG10.12484394506866417No Hit
AATTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGGGCTACAGTTTCTGCCTN10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTATTGGTGCTACAGTTTCTGCCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTGACGGTATTTTTCGTGGGACCAAGTCTCT10.12484394506866417No Hit
TGTGTTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGCTCAGAACGGTATTTTTCGTGAGACCAAGTCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGTTAATGCCTAATGGTGCTACAGTTTCTGCCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGTTAATGCTAATGGTGCTACAGTTTCTGCCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTTCTGAACGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCCC10.12484394506866417No Hit
ACTTTAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCT10.12484394506866417No Hit
ACTTAAAACAAGGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
ACTTAAAAAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCTG10.12484394506866417No Hit
TGGTGTGTGTTTCTGTGGGTAAGCAGTGGTATCAACGCAGAGTACATGGA10.12484394506866417Clontech Universal Primer Mix Long (96% over 27bp)
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGTCAGAAGGGTAAAG10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTGCAGTTTCTGCCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAACGCTAATGGTGCTACAGTTTCTGCCTC10.12484394506866417No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTAGGACAGAAGGGTAAAG10.12484394506866417No Hit
TGTGTGTTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.12484394506866417No Hit
ACTTAAAAACAGGCAGTCTGAACGGTATTTTTCGTGAGACCAAGTCTCTG10.12484394506866417No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTGAAG10.12484394506866417No Hit
TGTGTGTGTGTTTCTGTGGGAAGCAGTGGTATCAACGCAGAGTACATGGG10.12484394506866417Clontech Universal Primer Mix Long (96% over 26bp)
TATGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTCCTGCCTC10.12484394506866417No Hit
ACTTAAAAACAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTATCAACGCAGAAGAGGTCCATTCTAGTGC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTATCTGCCT10.12484394506866417No Hit
ACTTAAAAACAAGGCACTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTCGGACAGAAGGGTAAAG10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCCACAGTTTCTGCCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGCCCAAGTCTC10.12484394506866417No Hit
TGTATGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.12484394506866417No Hit
TGTGTGTGTGTTTCTGTGGGTTTCCTTAAGGTTTGGACAGAAGGGTAAAG10.12484394506866417No Hit
TGTTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAGGC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCCAATGGTGCTACAGTTTCTGCCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATATTTCGTGAGACCAAGACTC10.12484394506866417No Hit
ACTTAAAAACAAGGTAGTTCTGAACGGTATTTTTCGTGAGACCAAGTCTC10.12484394506866417No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAAGGTAAAG10.12484394506866417No Hit
CCTTAAAAACAAGGCAGCTCTGAACGGTAATTTTCGTGAGACCAACTCTC10.12484394506866417No Hit
ATTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
ACTTAAAAACAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT10.12484394506866417No Hit
ACTTAAAAACAACGCAGTTCTGAACGGTATTTTTCGTGAGACCAAGTCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATCCTAATGGTGCTACAGTTTCTGCCTC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGCTCTAACGGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCTAATGTCTAATGGTGCTACAGTTTCTGCCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTTCTGTGCCCTCCCAGGTACCCCAAGCTGGCAG10.12484394506866417No Hit
ACTTAAAAACAAGGCCGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC10.12484394506866417No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTATGGACAGAAGGGTAAAG10.12484394506866417No Hit
TGGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCGAAGAGGTCCATTCTAGTGCCTTCGTGAGA10.12484394506866417No Hit
ACTTAAAAACAAGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGTGCAAATGCTAATGGTGCTACAGTTTCTGCCTC10.12484394506866417No Hit
TGTGTGTGTTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.12484394506866417No Hit
ACTTAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAGC10.12484394506866417No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAGGGTTTGGACAGAAGGGTAAAG10.12484394506866417No Hit
ACTTAAAAAAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAACTCTCT10.12484394506866417No Hit
ACTTAAACACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCT10.12484394506866417No Hit
ACTTAAAAACAAGGCAGCTCTGACGGTATTTTTCGTGAGACCAAGTCTCT10.12484394506866417No Hit
TGTGTGTGTGTTTCTGGGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.12484394506866417No Hit
ACTTAAAAACAAGGCAGCTATGAACGGTATTTTTCGTGAGACCAAGTCTC10.12484394506866417No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)