FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151403

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151403
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences379
Total Bases54.9 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG15039.577836411609496No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC7720.316622691292878No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTC7018.46965699208443No Hit
ACTTAAAAACAAGGCAGTTCTGAACGGTATTTTTCGTGAGACCAAGTCTC379.762532981530343No Hit
ACTTAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT41.0554089709762533No Hit
GTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC30.79155672823219No Hit
ACTTAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT20.5277044854881267No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTCAAGGTTTGGACAGAAGGGTAAAG20.5277044854881267No Hit
ACTTAAAAACAAGGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTC20.5277044854881267No Hit
ACTTAAAAACAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT10.2638522427440633No Hit
ACTTAAAAACAAGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT10.2638522427440633No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGCTTGGACAGAAGGGTAAAG10.2638522427440633No Hit
ACTTAAAAAAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.2638522427440633No Hit
TGTGTGTGTGTTTTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.2638522427440633No Hit
ACTTAAAAACAAGGCAGTGCTAATGATAATGGTGCTACAGTTTCTGCCTC10.2638522427440633No Hit
ACTTAAAAACAAGGCAGTTCTGAACGGTATTTTCGTGAGACCAAGTCTCT10.2638522427440633No Hit
TGTGTATGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.2638522427440633No Hit
ACTTAAAAACAAGGCAGCTCTGAACGTATTTTTCGTGAGACCAAGTCTCT10.2638522427440633No Hit
ACTTAAAAACAAGGCAGTTCTAATGCTAATGGTGCTACAGTTTCTGCCTC10.2638522427440633No Hit
ACTTAAAACAGGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTCTG10.2638522427440633No Hit
CTTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.2638522427440633No Hit
TGTGTGTGGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.2638522427440633No Hit
ACTTAAAAACAACGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC10.2638522427440633No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCCC10.2638522427440633No Hit
ACTTAAAACAAGGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.2638522427440633No Hit
ACTTAAAAACAAGGCAGTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.2638522427440633No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGTCTTGGACAGAAGGGTAAAG10.2638522427440633No Hit
ACTTAAAAACAAGGCAGCTCTGACGGTATTTTCGTGAGACCAAGTCTCTG10.2638522427440633No Hit
ACTTAAAAACAAGGCAGTGCTATCAACGAAGAGGTCCATTCTAGTGCTTC10.2638522427440633No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAGGGTTTGGACAGAAGGGTAAAG10.2638522427440633No Hit
ACTTAAAACAAGGCAGTTCTGAACGGTATTTTCGTGAGACCAAGTCTCTG10.2638522427440633No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGATAGAAGGGTAAAG10.2638522427440633No Hit
ACTTAAAAACAAGGCAGTTCTGACGGTATTTTTCGTGAGACCAAGTCTCT10.2638522427440633No Hit
TGTGTGGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.2638522427440633No Hit
TGTTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.2638522427440633No Hit
TGTGTGTGTGTTTCTGCGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.2638522427440633No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAATG10.2638522427440633No Hit
ACTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.2638522427440633No Hit
TGTGTGTGTGTTTCTGTGGGTTCCTTTAAGGTTTGGACAGAAGGGTAAAG10.2638522427440633No Hit
ACTTAAAAACAAGGCGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT10.2638522427440633No Hit
ACTTAAAAACAGGGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTC10.2638522427440633No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)