FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151436

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151436
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences325
Total Bases47.1 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC49

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC15046.15384615384615No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG5216.0No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG309.230769230769232No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACT113.3846153846153846No Hit
AATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT72.1538461538461537No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATAC61.8461538461538463No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG61.8461538461538463No Hit
AAATACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT51.5384615384615385No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC30.9230769230769231No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCATAGCACT30.9230769230769231No Hit
AAATACCGTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT20.6153846153846154No Hit
AAAACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.6153846153846154No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGATGCTGGAACC20.6153846153846154No Hit
AAATACCGTTCAGACTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.3076923076923077No Hit
AAATACCGTTCAGAACTGCCTTGTTTAAGTAAGACGTGTAGAACCATGTC10.3076923076923077No Hit
AAATACCGTTCGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGTTTGCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATAGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTCCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTTCAGAGCAGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCATGAGCTTGCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTTCAAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.3076923076923077No Hit
AAATCCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.3076923076923077No Hit
GGCACTAGAATGGACCTCTTCCTCATCACCACATTATTTCAATTAAATAC10.3076923076923077No Hit
GGCACTAGAATGGACCTCTGCGTTGATAGCACTGCCTTGTTTTTAAGTAA10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGAAGACGTGTAGAACCATGT10.3076923076923077No Hit
AAATACCTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAACACTG10.3076923076923077No Hit
AAATACCGTTCAGAGCTGACACCAAGAGCTTGCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTTAAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGATCAGAGCTGCCACCAAGAGCATGCAAATTGATGCTGGAACC10.3076923076923077No Hit
AAATACCTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.3076923076923077No Hit
AAATACCTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTAGCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.3076923076923077No Hit
AAATACCGTCCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCCGCTGGAACC10.3076923076923077No Hit
GGCACTGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA10.3076923076923077No Hit
GGCACTAGAATGGACCTCTTCGTTGATAGCACTGCCTTGTTTTTAAGTAA10.3076923076923077No Hit
AAATACCGTTCAGAGCGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGGGGGCACAGCACT10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCGAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGATAAGAGCTGCAACAAAGAGCTTGCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCATCTTGGGGTCCCTGGGAGGGCATAGCACT10.3076923076923077No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGAAGACGTGTAGAACCATGT10.3076923076923077No Hit
AAATACCGTTCGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTGCAAATTGCTGCTGGAACCT10.3076923076923077No Hit
AATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACTG10.3076923076923077No Hit
AAATACCTTTCATAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGACCCATG10.3076923076923077No Hit
AATACCGTTCAGAACTGCCTTGTTTTTAAGTAAGACGTGTAGAACCATGT10.3076923076923077No Hit
AAATACCGTTCAGAGCAGCCTTGTTTTTAAGTAAGACGTGTAGAACCATG10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGCACC10.3076923076923077No Hit
AAAGACAGATAAGAGCAGCCACCAACAGATAGCAAATTCCAGATGGAACA10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACAGAAACACACACAAAAGACGTGTAGAAC10.3076923076923077No Hit
AAATACCGTTTCAGAGCTGCCTTGTTTTTAAGTAAGACGTGTAGAACCAT10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGGGCTTGCAAATTGCTGCTGGAACC10.3076923076923077No Hit
AAATACCGTTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAAC10.3076923076923077No Hit
AAATACCGTTCAGTGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGGACC10.3076923076923077No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGTAACC10.3076923076923077No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)