FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151447

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151447
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences189
Total Bases27.4 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC47

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCT11058.201058201058196No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTC3920.634920634920633No Hit
ACTTAAAAACAAGGCAGTTCTGAACGGTATTTTTCGTGAGACCAAGTCTC2010.582010582010582No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTCGTGAGACCAAGTCTCT31.5873015873015872No Hit
ACTTAAAAACAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC21.0582010582010581No Hit
ACTTAAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAG21.0582010582010581No Hit
ACTTAAAAACAAGGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTC21.0582010582010581No Hit
ACTTAAAAACAAGGCAGTGGTATCAACGAAGAGGTCCATTCTAGTGCCTT10.5291005291005291No Hit
ACTTAAAAAAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.5291005291005291No Hit
CTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.5291005291005291No Hit
ACTTAAAAACAAGGCAGCTCGAACGGTATTTTTCGTGAGACCAAGTCTCT10.5291005291005291No Hit
ACTTAAAAACAAGGCAGTGCTACTGCCTAATGGTGCTACAGTTTCTGCCT10.5291005291005291No Hit
ACTTAAAAACAAGGCAGTGTTAATGCCTAATGGTGCTACAGTTTCTGCCT10.5291005291005291No Hit
ATTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.5291005291005291No Hit
ACTTAAAAACAAGGCAGCTTGAACGGTATTTTTCGTGAGACCAAGTCTCT10.5291005291005291No Hit
ACTTAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTCT10.5291005291005291No Hit
ACTTAAAAACAAGGCCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCC10.5291005291005291No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATCGTGCTACAGTTTCCGCCT10.5291005291005291No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)