FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151451

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151451
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences294
Total Bases42.6 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG12341.83673469387755No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC4715.98639455782313No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCT3812.925170068027212No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTC3210.884353741496598No Hit
ACTTAAAAACAAGGCAGTTCTGAACGGTATTTTTCGTGAGACCAAGTCTC103.4013605442176873No Hit
ACTTAAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAG82.7210884353741496No Hit
ACTTAAAAACAAGGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTC31.0204081632653061No Hit
ACTTAAAAACAAGGCAGTGTTAATGCCTAATGGTGCTACAGTTTCTGCCT20.6802721088435374No Hit
ACTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT20.6802721088435374No Hit
ACTTAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC20.6802721088435374No Hit
ACTTAAAAACAAGGCAGTGCTGTGCCCTCCCGGGTACCCCAAGCTGGCAG20.6802721088435374No Hit
ACTTAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT20.6802721088435374No Hit
ACTTAAAAACAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT10.3401360544217687No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAGG10.3401360544217687No Hit
ACTTAAAAAAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT10.3401360544217687No Hit
ACTTAAAAACAAGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT10.3401360544217687No Hit
TGTGTGTGTGTTTCTGTGTTTGTCGAAGAGGTCATTCTAGTGCCTTCGTG10.3401360544217687No Hit
TGTGTGCGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACTGAAGGGTAAAG10.3401360544217687No Hit
ACTTAAAAACAAGGCAGCTCGAACGGTATTTTTCGTGAGACCAAGTCTCT10.3401360544217687No Hit
ACTTAAAAACAAGGCAGCTCTGAACGTATTTTTCGTGAGACCAAGTCTCT10.3401360544217687No Hit
TGTGTGTGTGTTTCTGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGT10.3401360544217687No Hit
TGTGTGTGTGTTTCTGTGAGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.3401360544217687No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTTCTACAGTTTCTGCCT10.3401360544217687No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTCTGCCTCT10.3401360544217687No Hit
ACTTAAAAACAAGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAGC10.3401360544217687No Hit
ACTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.3401360544217687No Hit
ACTTAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAGC10.3401360544217687No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTGCAGTTTCTGCCTC10.3401360544217687No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTCTAAGGTTTGGACAGAAGGGTAAAG10.3401360544217687No Hit
ACTTAAAAACAAGGCAGTGCTATCAACGAAGAGGTCATTCTAGGCCTTCG10.3401360544217687No Hit
TGTGTGTGTGTTTCTGCGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.3401360544217687No Hit
ACTTAAAAACAAGGCAGTGCTATGCCCTCCCAGGTACCCCAAGCTGGCAG10.3401360544217687No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAATGTTTGGACAGAAGGGTAAAG10.3401360544217687No Hit
TGTGTGTGTGTTTCGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.3401360544217687No Hit
TGTGTGTTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.3401360544217687No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)