FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008151523

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008151523
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences340
Total Bases49.2 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC44

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG12035.294117647058826No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCT7321.470588235294116No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC4011.76470588235294No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTC3811.176470588235295No Hit
ACTTAAAAACAAGGCAGTTCTGAACGGTATTTTTCGTGAGACCAAGTCTC154.411764705882353No Hit
ACTTAAAAACAAGGCAGCTCGAACGGTATTTTTCGTGAGACCAAGTCTCT20.5882352941176471No Hit
ACTTAAAAACAAGGCAGCTCTGAACGGTATTTTCGTGAGACCAAGTCTCT20.5882352941176471No Hit
ACTTAAAACAAGGCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTCT20.5882352941176471No Hit
ACTTAAAAACAAGGCAGTGCTGATGCCTAATGGTGCTACAGTTTCTGCCT20.5882352941176471No Hit
ACTTAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTCT20.5882352941176471No Hit
TGTGTGTGTGTTTCTGTGTGGCAGCTCTGAACGGTATTTTTCGTGAGACC20.5882352941176471No Hit
ACTTAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC20.5882352941176471No Hit
ACTTAAAAACAAGGCAGTGCTATGCCCTCCCAGGTACCCCAAGCTGGCAG20.5882352941176471No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAGG10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTGAAG10.29411764705882354No Hit
TGTGTGTGTGTCTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAACG10.29411764705882354No Hit
TGTGTGTGTGTTTCTTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.29411764705882354No Hit
ACTTAAAAACAAGGCAGCTCTGAACGTATTTTTCGTGAGACCAAGTCTCT10.29411764705882354No Hit
ACTTAAAAACAGGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.29411764705882354No Hit
AATTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC10.29411764705882354No Hit
CGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.29411764705882354No Hit
ACTTAAAAACAAGGCGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTC10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCCACAGTTTCTGCCT10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGTTTTGGACAGAAGGGTAAAG10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTATCAACGAAGAGGTCCATTCTAGTGCCTT10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAGC10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCATTAAGGTTTGGACAGAAGGGTAAAG10.29411764705882354No Hit
ACTTAAACACAAGGCAGTGCTAATGCTAATGGTGCTACAGTTTCTGCCTC10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTGCTACAGTTCCTGCCT10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTCTGAACGGTATTTTCGTGAGACCAAGTCTCTG10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGAGCTACAGTTTCTGCCT10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTAGTGCTAATGGTGCTACAGTTTCTGCCTC10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTAATGCTAATGGTGCTACAATTTCTGCCTC10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTGTGGACAGAAGGGTAAAG10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTTCTGAAACGGTATTTTTCGTGAGACCAAGTCT10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGCTTGGACAGAAGGGTAAAG10.29411764705882354No Hit
ACTTAAAAACAAGTCAGCTCTGAACGGTATTTTTCGTGAGACCAAGTCTC10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGGAGGGTAAAG10.29411764705882354No Hit
ACTTAAAAACAAGGCAGCTCTAACGGTATTTTTCGTGAGACCAAGTCTCT10.29411764705882354No Hit
CTTAAAAACAAGCAGTGCTAATGCCTAATGGTGCTACAGTTTCTGCCTCT10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTAATGCATAATGGTGCTACAGTTTCTGCCT10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTGTGCCCTCCCAGGTACCCCAAGCTGGCAG10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACAGAGGGGTAAAG10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCGTTAAGGTTTGGACAGAAGGGTAAAG10.29411764705882354No Hit
TGTGTGTGTGTTTCTATGGGTTTCTTTAAGGTTTGGACAGAAGGGTAAAG10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGGTTTCTTTAAGGTTTGGACTGAAGGGTAAAG10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTAATGCCTAATGGTACTACAGTTTCTGCAT10.29411764705882354No Hit
TGTGTGTGTGTTTCTGTGGCAGCTCTGAACGGTATTTTTCGTGAGACCAA10.29411764705882354No Hit
ACTTAAAAACAAGGCAGTGCTGAACGGTATTTTTCGTGAGACCAAGTCTC10.29411764705882354No Hit
ACTTAAAAACAAGGCAGCTATGAACGGTATTTTTCGTGAGACCAAGTCTC10.29411764705882354No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)