FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008152150

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008152150
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences14947
Total Bases2.1 Mbp
Sequences flagged as poor quality0
Sequence length141-145
%GC34

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATAC592039.60661002207801No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC298319.957182043219376No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC157210.517160634240986No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC7274.863852278049107No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTTTACGCTGTAGAACCATG1871.251087174683883No Hit
GGCACTAGATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA1190.7961463838897438No Hit
GGCACTAGAATGGACCTCTTCGTTGATAGCACTGCCTTGTTTTTAAGTTT1080.7225530206730448No Hit
GCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA810.5419147655047836No Hit
GGCACTAGAATGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA580.38803773332441294No Hit
GGCACTAGATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA560.3746571218304677No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTTTACGCTGTAGAACCATG530.35458620458954976No Hit
GGACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA500.33451528734863184No Hit
GGCACTAGAAGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA490.3278249816016592No Hit
GGCACTAAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA450.30106375861376866No Hit
GGCACTGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA440.294373452866796No Hit
GGCACTAGAATGGCCCTCTTCCTCATCACTACATTATTTCAATTAAATAC370.24754131263798754No Hit
GGCATAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA370.24754131263798754No Hit
GCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA340.22747039539706965No Hit
GGCACAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA320.2140897839031244No Hit
GGCACTAGAATGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA260.17394794942128855No Hit
GGCACTAAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA260.17394794942128855No Hit
GGCACTGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA260.17394794942128855No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTTTACGCTGTAGAACCATG250.16725764367431592No Hit
AATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT250.16725764367431592No Hit
GGCACTAGAATGGACCTCTTCGTCATCACTACATTATTTCAATTAAATAC240.16056733792734326No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATAT240.16056733792734326No Hit
GGCACTAGAAGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA240.16056733792734326No Hit
GGCACTAGAATGGACCTCTTCTCATCACTACATTATTTCAATTAAATACA240.16056733792734326No Hit
GGCACTAGAATGGACCCTTCCTCATCACTACATTATTTCAATTAAATACA230.15387703218037063No Hit
GGCATAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA220.147186726433398No Hit
GGACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA220.147186726433398No Hit
GGCCTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATACA200.13380611493945274No Hit
AAATACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT190.1271158091924801No Hit
GGCACAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA180.12042550344550747No Hit
GGCACTAGAATGGACTCTTCCTCATCACTACATTATTTCAATTAAATACA170.11373519769853482No Hit
GGCACTAGAATGGACCTCTTCCTCATCGCTACATTATTTCAATTAAATAC170.11373519769853482No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATCATTTCAATTAAATAC170.11373519769853482No Hit
GGCACTAGAATGGACTCTTCCTCATCACTAAATTATTTCAATTAAATACA160.1070448919515622No Hit
GGCACTAGAATGGACCTCTTCCTCACCACTACATTATTTCAATTAAATAC160.1070448919515622No Hit
GGCACTAGAATGGACCTCTCCCTCATCACTACATTATTTCAATTAAATAC160.1070448919515622No Hit
GGCACTAGAATGGATCTCTTCCTCATCACTACATTATTTCAATTAAATAC150.10035458620458956No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACGTTATTTCAATTAAATAC150.10035458620458956No Hit
GGCACTAGAATGGCCTCTTCCTCATCACTAAATTATTTCAATTAAATACA150.10035458620458956No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTCCAATTAAATAC150.10035458620458956No Hit
GGCACTAGAATGGCCTCTTCCTCATCACTACATTATTTCAATTAAATACA150.10035458620458956No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACAATATTTCAATTAAATAC150.10035458620458956No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)