FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008153028

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008153028
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences904
Total Bases131 kbp
Sequences flagged as poor quality0
Sequence length144-145
%GC48

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC26729.535398230088493No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATG18720.6858407079646No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC17018.805309734513273No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATAC404.424778761061947No Hit
AAATACCGTTCAGAACTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATG323.5398230088495577No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATG131.4380530973451326No Hit
AATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT70.7743362831858407No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACT70.7743362831858407No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAATTAAATAC40.4424778761061947No Hit
AATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT40.4424778761061947No Hit
AATACCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT40.4424778761061947No Hit
AAATACCGTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT30.33185840707964603No Hit
AAATACCGTTCAGGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT30.33185840707964603No Hit
AAATACCGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCATAGCACT30.33185840707964603No Hit
AAATACCGTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.22123893805309736No Hit
AAATACCGTTCAGAGCAGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC20.22123893805309736No Hit
AAATACCGTTCAGACTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT20.22123893805309736No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACT20.22123893805309736No Hit
AAATACCGTTCGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT20.22123893805309736No Hit
GGCACAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA20.22123893805309736No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGATGCTGGAACC20.22123893805309736No Hit
GGCACTAAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA20.22123893805309736No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGATGCTGGAACC20.22123893805309736No Hit
GGCACTAGATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA20.22123893805309736No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAGTGGCTAATGTAGAACCATGT20.22123893805309736No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTCGCAAATTGCTGCTGGAACC20.22123893805309736No Hit
AAATACCGTTCAGAACTGCCTTGTTTTAAGTGGCTAATGTAGAACCATGT20.22123893805309736No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATCGCTGCTGGAACC20.22123893805309736No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGATTGCAAATTGCTGCTGGAACC20.22123893805309736No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGACCC20.22123893805309736No Hit
AAATACCGTTCAAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.22123893805309736No Hit
AAATACCGTTCAGAGCTGCCACCAGGGGCTTGCAAATTGCTGCTGGAACC20.22123893805309736No Hit
AAATACGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT20.22123893805309736No Hit
GGCACTAGAATGGACCTCTTCGCCAAGCAAACTGGACCCACAGAAACACA20.22123893805309736No Hit
AAATACCGTTAAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
GGCCTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA10.11061946902654868No Hit
AAATACCGTTCAGAGTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCAACAAGGAGCTTGCAAATTGAAGATGTAACC10.11061946902654868No Hit
AAATACAGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAGCC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCAACCAGGAGCTTTCAAATTGCTGATGGAACA10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGACCC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTCGAACCATG10.11061946902654868No Hit
AAATACCGTTAGCACTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAATACCGTTAAGAGCTGCAACCAGGAGATTTCAAATTGCTGCTGGAAAC10.11061946902654868No Hit
AAATACCGTTCACAGCTGCCATGTTTTTAAGTCGCTAATGAAGAACCAAG10.11061946902654868No Hit
GCACTAGAATGGACCTCTTCCTCATCACTAAATTATTTCAATTAAATACA10.11061946902654868No Hit
AAATCCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAATGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAGCCATG10.11061946902654868No Hit
AAATACCTTTCAGAGCTGCCACCAGGAGCTAGCAAATTGCAGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACGGCGTCTCCAGACCCAGCTCCGGCCGGG10.11061946902654868No Hit
AAAACCGATCAGAGCAGACACCAAGAGATTCCAAATTGATCCTGGAAACT10.11061946902654868No Hit
AAATACTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGTCG10.11061946902654868No Hit
ATATACGTTCAGAGCTGCCACCAAGCGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
AAAAACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAGTTATTTCAATTAAATAC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTGGATAATGTAGAACCATG10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGTGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAATC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGATGGAACC10.11061946902654868No Hit
GGCACTAGAATGGACATCTTAGCCAAGCAAACTGGACCCACAGAAACACA10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCGAATTGCTGCTGGAACC10.11061946902654868No Hit
AAAACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTACTGGAACCT10.11061946902654868No Hit
GGCACTAGAATGGACCTCTACGCCAAGCAAACTGGACCCACAGCAACACA10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGCACC10.11061946902654868No Hit
GGCACTAGAATGGACCTCTTCGCCAAGCAAACTGGCCCACAGAAACACAC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGTAAATTGCTGCTGGAACC10.11061946902654868No Hit
GGCACTAGAATGGACCTCTTCGCCAAGCAAACTGGGCCCACAGAAACACA10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTACTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTTCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTACAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAAAGTAGAACCATC10.11061946902654868No Hit
GGCACTAGAATGGACCTCTTCGCCAAGCAAACTGGATAATATTGAGACAG10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTCCAAATTGCTGATGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGATCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGCACTGCCTTGTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCCGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTGAGTGGCTAATGTAGAACCATG10.11061946902654868No Hit
AAATACCGTTCAGAGTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
AAATCCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGCTTTTAAGTGGCTAATGTAGAACCATG10.11061946902654868No Hit
AAATACCGTTCAGAGCTGTCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
ATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCTG10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGATTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
GGCACTAGAATGGACCTCTTCGTTGATAGCACTGCCTTGTTTTTAAGTGG10.11061946902654868No Hit
AAATACCGTACAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAAAC10.11061946902654868No Hit
AAAACCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCAGCTGGACCC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAAATGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTCCTGCTGGAACC10.11061946902654868No Hit
AAACACCGTTCAGAACTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATG10.11061946902654868No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTACATTATTTCAGTTAAATAC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGTTGGAACC10.11061946902654868No Hit
AAATCCGTTCAGAACTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGTTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGACTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
GGCACTAGAATGGACCTCTTCCTCATCACTAAAATATTTCAATTAAACAC10.11061946902654868No Hit
AAATACAGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTATAACCATG10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCCTGCAAATTGCTGCTGGAATC10.11061946902654868No Hit
AAATACCGTTCAAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTAAAGTGGCTAATGTAGAACCATT10.11061946902654868No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTGGCTAATGTAGAACATGT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAATTGGATAATGTAGAACCATG10.11061946902654868No Hit
AAATACCGTTAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AATACCGTTCAAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGTC10.11061946902654868No Hit
AAATATCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATG10.11061946902654868No Hit
AAATACCGTTCAGAGCCGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCCCCAGGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AATTACCGTTCAGAGATGACACCAGGAGCTTGCAAATTGCTTCTGGAACC10.11061946902654868No Hit
AAATACCTTCAGAACTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAAC10.11061946902654868No Hit
AAATACCGTTAAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGCGCAGCCACCAAGAGCTAGCAAATTGCAGCTTGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGAAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACATGT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATT10.11061946902654868No Hit
AAATACCGTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGTTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTTGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGTGCCCCCAAGAGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCCGCTGGAACC10.11061946902654868No Hit
AAATACCGCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACCTG10.11061946902654868No Hit
AAACACCGTTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATG10.11061946902654868No Hit
AAATACCTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
AAATACCGATCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAGCC10.11061946902654868No Hit
AAATACCGTTCAAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
AAATACTGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACGTTCAGAGCTGCCAGCTTGGGGTACCTGGGAGGGCACAGCACTG10.11061946902654868No Hit
AATACCGTTCAGAGCTGCCTTGTTTTAAGTGGCTAAGGTAGAACCATGTC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCTTGTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAATACCGTTAGAGCTGCCACCAAGAGCTTGCAAATTGCTACTGGAACCT10.11061946902654868No Hit
GGCACTAGAATGGACCTATTCCTCATCACTAAATTATTTAAATTAAATAC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATTGCTGCTGGGACC10.11061946902654868No Hit
AAATACCGTTCAGAGTTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
GGCACTAGAATGGACCTCTACGCCAAGCAAACTGGACCCACAGAAACACA10.11061946902654868No Hit
AAATCCCGTTCAGAGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCGAGCTGCCACCAAGAGCTTGCAAATTGCTACTGGAACCT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGGCTTGTTTTTAAGTGGCTAATGTAGAACCATG10.11061946902654868No Hit
AAATACCGCTCAGAGCTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATG10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAACTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCGGGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGCACTGCCTTGTTTTTAAGTGGCTAATGTAGACCATGT10.11061946902654868No Hit
AAATACTGTTCAGAACTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATG10.11061946902654868No Hit
AATACCGTTCAGCACTGCCTTGTTTTTAAGTGGCTAATGTAGAACCATGT10.11061946902654868No Hit
AAATACCGTTCAGCGCTGCCACCAAGAGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAAGGGCTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AAATACCGTTCAGAGCTCCACCTGGAGCTTGCAAATTGCTGCTGGAACCT10.11061946902654868No Hit
AAATACCGTTCAGAGCAGCCTTGTTTTTAAGTGGCTAATGTAGAACCATG10.11061946902654868No Hit
GGCACTAGAATGGACCTCTTCGTTGATACCACTGCTCCCATGTACTCTGC10.11061946902654868Clontech SMARTer II A Oligonucleotide (95% over 21bp)
AAATACCGTTCAGAGCTGCCACCAAGAGCCTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit
AATACCGTTCAGAGCTGCCACCAGGAGCTTGCAAATCGCTGCTGGAACCT10.11061946902654868No Hit
AAATACCGTTCAGAGCTGCCACCAGGAGTTTGCAAATTGCTGCTGGAACC10.11061946902654868No Hit

[FAIL]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)