FastQCFastQC Report
Thu 31 Aug 2023
EGAF00008155627

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008155627
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences69009929
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTGGTAGATGCAGGTTCCATAGCGACGTTCTCCTGCAATGCACGCTGGT1430570.20729915545920938No Hit
CCCAGAGTCTTCCCTGGTAGATGCAGGTTCCATAGCGACGTTCTCCTGCAA830930.12040731124357482No Hit
CCAGAGTCTTCCCTGGTAGATGCAGGTTCCATAGCGACGTTCTCCTGCAAT737330.1068440455865416No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)