FastQCFastQC Report
Thu 31 Aug 2023
EGAF00008155658

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008155658
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences62859948
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACGAGATTCCATCTCGTATG1220270.19412520035810402TruSeq Adapter, Index 7 (97% over 38bp)
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA652430.10379104990669097No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)