FastQCFastQC Report
Thu 31 Aug 2023
EGAF00008155679

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008155679
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences72261194
Sequences flagged as poor quality0
Sequence length51
%GC53

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCTCGTATG4046870.5600336468284761TruSeq Adapter, Index 7 (97% over 36bp)
GCGGGAAGTAGGTCTTGGTGGTGGGGAAGGACAGGAACATCCTCTCCAGGG1389310.19226225351327575No Hit
GATCGGAAGAGCACACGTCTGAACTCCAGTCACCGGCTATGATCGCGTATG1324700.18332107825397959TruSeq Adapter, Index 7 (97% over 36bp)
GGGAGGAGGGCCCGTTGGGAGGCCCAGCGGGCAGGAGGAACGGCTACCGAG948080.1312018176727055No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)