FastQCFastQC Report
Thu 31 Aug 2023
EGAF00008157208

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008157208
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences63869978
Sequences flagged as poor quality0
Sequence length51
%GC50

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCCTGGTAGATGCAGGTTCCATAGCGACGTTCTCCTGCAATGCACGCTGGT1532200.2398936163716856No Hit
GCCCAGAGTCTTCCCTGGTAGATGCAGGTTCCATAGCGACGTTCTCCTGCA738870.1156834592928778No Hit
CCCAGAGTCTTCCCTGGTAGATGCAGGTTCCATAGCGACGTTCTCCTGCAA710820.11129172457206733No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)