FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008161170

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008161170
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2206
Total Bases370.1 kbp
Sequences flagged as poor quality0
Sequence length25-200
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTATGGTGCTGGGTGCAGATGCAGTGTGGCTCTGGATAGCACCTTATGGA70.3173164097914778No Hit
GGGATGATGAGGCTTGCAGCATGGACACCAACTAATGCTGACTCCACGAT60.271985494106981No Hit
CTCCCAGTCCTAGCTGCTGGCATCACTATACTACTAACAGACCGCAACCT60.271985494106981No Hit
GAACTAGTTAGTGCAGCTTTTCATTGTGTTGTGTGGTTGGTCTCATAACT60.271985494106981No Hit
ATGAAGTACAGTGTTCTAGGTTTGCTGAGAAGGCTTCATTAAATTAATCT60.271985494106981No Hit
AGGTAGCTCAAGCCTGTAATCCTGGCACTTTGGGAGGCCGAGGCAGGCAG50.22665457842248413No Hit
GAACTACTGACCTCAAGTGATCCACCTGCCTCAGGCTCCCAACTAATATA50.22665457842248413No Hit
GTCATGCTGAAAGGCTGTGTGGTGGGAACCAAGAAGCGGGTGCTCACCCT50.22665457842248413No Hit
CCCTAATACCTGCCACCCCACTCTTAATCAGTGGTGGAAGAACGGTCTCA50.22665457842248413No Hit
TAATTAGGCTGATGAGGGGGCTTATGCCTATAATCTCAACACTTTGGAGG50.22665457842248413No Hit
GTATAATAAATGTTTGTATGTGGTTGAACATCATTATTGTTATTGTTTTT50.22665457842248413No Hit
AGGCTCTCTCATTGGTTTATACTTCAATATAAGCCTTGGTAGGGATAGAT50.22665457842248413No Hit
GTCCCTTTCCCGGATGATCCGGAAGATGAAGCTTCCTGGCCGGGAAAACA50.22665457842248413No Hit
CCCCAGCGCTTCGCAAGGTCTACGACCAGATGCCGGAGCCGCGCTACGTG50.22665457842248413No Hit
CGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGCGGGCGGATCACGAGGT50.22665457842248413No Hit
GTATAAGGTCATAGGTATAATCACTATTTTACAGATGAGGAAACGAGATT50.22665457842248413No Hit
ATTTGAACATGACCCATCTGAGTCTATCGATGAATTTAATAAGTCATCAG40.1813236627379873No Hit
GGTGAATGCTGCTAAAAACAAGACTGGGGCTGCTCCCATCATTGATGTGG40.1813236627379873No Hit
GAGGAGACCAGGCGATGGGAGACAGGCATGGTGCTGCTTCTGCTGCTCCA40.1813236627379873No Hit
CTTCATATCCCTCTAGAGGAGCCTGTTCTGTAATCGATAAACCCCGATCA40.1813236627379873No Hit
CCTCTGGCCTGCAGTATCTGGAGGAAGCACCCAAGTTCCTGGCCTTCACC40.1813236627379873No Hit
TTACTGACAATATCCTGGAGGCCCCTATTTTTGAGCACTAAAGCCAATGT40.1813236627379873No Hit
GACCAGCCGCCGCAGCAGGGCGTTGCCTTCGAACAGACGCCGTGGGTCCT40.1813236627379873No Hit
GAGCCAAATCTGTGCTTCTAAGAATGCTGTGAGAGAGTTGGGCATGGTGC40.1813236627379873No Hit
TCACAGGACCTGGCTGTCAACCTCCTTGTTGCCCCCACTGTTGCCTTGAG40.1813236627379873No Hit
GAGCACTAACGGCCCTTGCCCTCTCCTTGCCATCATGAACATCCTCTTTC40.1813236627379873No Hit
GTTATCATGTCCATCCGCACCAAGCTGCAGAACAAGGAGCATGTGATTGA40.1813236627379873No Hit
GAATGGGTAGGAGCAACCACTGACTGGTCTTAAGCTGTTCTTGCATAGGC40.1813236627379873No Hit
CCACTATGCCTGGCTTGATTTGTGTTTTATTATCACCTCACACCAAAAAG40.1813236627379873No Hit
ATATTTATGAAGGCATTTAGTGTGTTTAACTTTTAGCTTTGTGTTTGAAA40.1813236627379873No Hit
TCTGGGAGGGAGAGATGGGAGGATTGCTTGAGGCCAGGAGTTCGAGACTA40.1813236627379873No Hit
GAGCGAGACTCTGTCTCAAAAGAAAAAGAAAGAAAGAGAGAAAGAAAGGA40.1813236627379873No Hit
ACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTT40.1813236627379873No Hit
CCTTTGTGCTGAACACCAAATCAACCTAATTAAGGTTGATGACAACAAGA40.1813236627379873No Hit
ACATGGTGAAACCCCATCTCTACTAAAAATATCCCTGCTACTTGGGAGGC40.1813236627379873No Hit
GTGCTGCTGATGTGCAACAAATCTTACTGTGCCGAGATCGCTCACAATGT40.1813236627379873No Hit
ATCTATCACCCTATAGAAGAACTAATGTTAGTATAAGTAACATGAAAACA40.1813236627379873No Hit
CCTAACCACCTACCTTACAGTGAGGGCTATACATGGTAGCCAGTTGAATT40.1813236627379873No Hit
GGTGTTTGCTTCTCTGCCATCAGGGTCGGGAGGCCACGCCAAGCATTGTG40.1813236627379873No Hit
GGCCGACTCCGAGCTGCAGCTGGTTGAGCAGCGGATCCGCAGCTTCCCCG40.1813236627379873No Hit
CCTACAAGCCTCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCA40.1813236627379873No Hit
CACCTACACCCCTTATCCCCATACTAGTTATTATCGAAACCATCAGCCTA40.1813236627379873No Hit
CAATTACAATGACAGATACGATGAGATCCGCCGTCACTGGGGTGGCAATG40.1813236627379873No Hit
TGCTTGGGATGTCTCTAGCTGGTCTGGGGATAGCTGGAGCACTTACTCAG40.1813236627379873No Hit
GCCCAGGCGCGGGGGGAGCGCAATCGCTCGTGTCTGACTGGCTGCCTCTG40.1813236627379873No Hit
TCCCCACTCTAAAATCATTTCTCCTTCAGTCTTCCTTATCCCATTCTCTC40.1813236627379873No Hit
AACTAAGTAATATGTTATTTAGGATAAGTACATCTATGGTAAAACCAAGC40.1813236627379873No Hit
GGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTG40.1813236627379873No Hit
GTTATGGCCATCTACCCCTGCTAGAAGGTTACAGTGTATTATGTAGCATG30.1359927470534905No Hit
GAATGAGCTAGTGTTAGACTTTAATACTGGAGAAAAATAACATCTACCTT30.1359927470534905No Hit
CTGCTGAATCAGCAGGTCTTCAATGATCCTCTCGTCTCTGAAGAAGACAT30.1359927470534905No Hit
GTATGGTGGCACATGCCTATAATCCCAGCTACTCGGGAGGCTGAGGCAGG30.1359927470534905No Hit
GTCCAGAAGAGATCCCTCCTATACCTGAAAATAGATTCCTAATGAGAAAA30.1359927470534905No Hit
CCTGTAATCCCAGCACTTTGGGAGGCCAAGCCAGGCAGATCACGAGGTCA30.1359927470534905No Hit
GCTGGCATCACTATACTACTAACAGACCGCAACCTCAACACCACCTTCTT30.1359927470534905No Hit
CGTGTATCCTCTCGATCACATACAGAAGAGGATTGCACGGAGGAGCTCTT30.1359927470534905No Hit
GAAGGTTATCTCCTCAGCCAACAGAGCTGTGGTTGGTGTGGTGGCTGGAG30.1359927470534905No Hit
GGGAACATGTATGTAAAATTCTCAGGCTTATGAGAATCACAACTGTATGT30.1359927470534905No Hit
CCAATGTGCTGCCCCCCTCTTAATACTCACCAATAAATTCTACTTCCTGT30.1359927470534905No Hit
TCTCTACGGAGTGTGCTCGGCTATAACAGCGAGTGCTACGCCTAAACTGG30.1359927470534905No Hit
GGTGAAACCCCGTCTCTACTAAAAATACCAAAAATTAGCCGGGCGTGGTG30.1359927470534905No Hit
ACACAGGGACATTGCAAAGACATGAAAGTCATCACATTAGAGATTTTTGC30.1359927470534905No Hit
GGCTCTCGTCACTGGGCTCTGTTTTCACTGTTCGTCTGCTGTCTGTGTCT30.1359927470534905No Hit
GGCTTGAGGCATCTGCGAGGCCTGCCGTGGTGCTGAAAATGGGTGTTGAG30.1359927470534905No Hit
AATCAACTCATTATTCCTCACAGATTTGTATTCTCCAGAGTATCCAGGTC30.1359927470534905No Hit
CTATTATATCACAGAACCCTAAGATGCCATCAATTCTAAGATACACCATA30.1359927470534905No Hit
AGGTTGCAGTGAGCTGAGATTGCGCCACGGCACTCCAGCCTGGATGACAG30.1359927470534905No Hit
TGTGTATACTGATTGAAATTTTTAACAGATTTGTACTTTTTTTAAAATGA30.1359927470534905No Hit
GTGTGACTTCATTGAGACACATTACCTGAATGAGCAGGTGAAAGCCATCA30.1359927470534905No Hit
TGAGAGTGCATTGCTCGATAGGGTCTGATGAACTGGGAGTAACCCACCAT30.1359927470534905No Hit
GGAATTCAGTGACACAAATATTAGCCCTTTTGTTACAGTCCCACAAGTCC30.1359927470534905No Hit
AGACTAGACTGGGCGCGGTGGCTCACGCCTGTAATCAATCCCAGCACTTT30.1359927470534905No Hit
GAATTAACAATGTAACCATATGGAAGCAACTTTTTTTGGTGTCTCAAAGG30.1359927470534905No Hit
CAATAATCCCCATCCTCCATATATCCAAACAACAAAGCATAATATTTCGC30.1359927470534905No Hit
GTCTTAATCTATCCCTCCAGCTGGCAGTTACTGTTTTTTTAATCCCCTGA30.1359927470534905No Hit
GGTCAGGAGTTCGAGACCAGCCTGGCCAACATGGTGAAACCCTGTCTCTA30.1359927470534905No Hit
CATATAGGTATATTCTGAATACAAGCTTATTCACATTTTGCTTCCTAATC30.1359927470534905No Hit
CCTATAATCTCAACACTTTGGGAGGCTGAGGCAGGCAGATTGCTTGAACC30.1359927470534905No Hit
GCATTTTGGGAGGCTGAGGTGGGTGGATCACGAAGTCAGGAGTTCAAGAT30.1359927470534905No Hit
GCTACAGAGAGGCCACTGTAGTAAGATGGTATCAGTCTTTCCATTAATAC30.1359927470534905No Hit
CCTCTGCCCTGATCATCAAAGCCCTCAAGGAACCACCAAGAGACAGAAAG30.1359927470534905No Hit
GGCCAACACAGTGAAACCCCGTCTCTACTAAAAATACAAAAATTAGCCAG30.1359927470534905No Hit
CCCCTAAGGGCTGTGGCACTGTCCTGCTCTCCGGTCCTCGCAAGGGCCGA30.1359927470534905No Hit
CTTCAGAGATCCTGCTCTTAAACGCAAGGCCCGACGGGAGGCCAAGGTCA30.1359927470534905No Hit
GTTCATACACCTATCCCCCATTCTCCTCCTATCCCTCAACCCCGACATCA30.1359927470534905No Hit
TCTGCGTCCTTAGCACCTAGCAGGGAGCCTGCTCACCTAAAGATTCAAAA30.1359927470534905No Hit
CCCCCACTGTTGCCTTGAGAATTGAAGACATGTAGGTGACTCACAAACTT30.1359927470534905No Hit
GCTTTACAAGAGGTTCTGAAGACTGCCCTCATCCACGATGGCCTAGCACG30.1359927470534905No Hit
GCATCTACCATGTGGTGGTCTGGAGTTGGTGAGAGACAGGATGGGGCTGA30.1359927470534905No Hit
GTGTATAACATTCACCTGGCTGTCAACTTCTTGGTGTCATTGCTCAAGAA30.1359927470534905No Hit
GCATTTCTGTGGATCCGAGGAGGCGGAACAAGTCCACGGAGTCCCTGCAG30.1359927470534905No Hit
CATTGGAGAAGAACCAAGCTGGGTCTATAAGGAATTGCACATGAGATGGC30.1359927470534905No Hit
GGTAGGAATGGGAGTATTTGCACTTGTGGTAACGGTATTTGCATTATTGA30.1359927470534905No Hit
CTGTCACTCAGAATGGAGTGTTGTGGTGTGATTATAGCTCTCTGCAGCCA30.1359927470534905No Hit
TTAATATTGCAGGAGGTTGACTTACATACAGTTGATAGATTTTAAGTCAT30.1359927470534905No Hit
AGCCAATGGTCTGGACAACAAGCTCCGTGAAGACCTGGAGCGACTGAAGA30.1359927470534905No Hit
CATGGGCATAGGTAAGCGGAAGGGTACAGCCAATGCCCGAATGCCAGAGA30.1359927470534905No Hit
CCTATATAGTATAGCTTCCCATCTTCTTTGAGAGTTGTTGGTTTATGCTC30.1359927470534905No Hit
CCCATAAACCCAGCTACTCAGGAGGCTGAGGCTGAGGCTGAGCCAAGATC30.1359927470534905No Hit
GATGACACCTTACACTTATGGAATTTACGTCAGAAGAGGCCTGCCATACT30.1359927470534905No Hit
GAATTCTTGATGGGTTTCTGTTAGTCATGTATTTTGCTAATAATTTCCCT30.1359927470534905No Hit
TTGTAAACAAAACCAGGTCAAGAAACAGAGGAGAGGGCCAGGCAGGGTGG30.1359927470534905No Hit
GGTCCAAGTAAACCGCTAGCTTGTTGCACCGTGGAGGCCACAGGAGCAGA30.1359927470534905No Hit
GACAACCATCATTCCCCCTAAATAAATTAAAAAAACTATTAAACCCATAT30.1359927470534905No Hit
CTTCTATGTGGTGCTGGGTAGGCCAGGTTTCAGCATCGCAGACAAGAAGC30.1359927470534905No Hit
GTGAAGTGCTTGAGGGGGCAGAACGTGTAAGGCATATCTCAAGTAAAGTG30.1359927470534905No Hit
GATCTAAATGTGAACAGTTTACTAATGCACTACTGAAGTTTAAATCTGTG30.1359927470534905No Hit
ATATGTACTCTCTGGACTACTTTGGACAGAAGTAGGTTTTTGAATGTAAC30.1359927470534905No Hit
TCAGAGTACTTCGAGTCTCCCTTCACCATTTCCGACGGCATCTACGGCTC30.1359927470534905No Hit
CATACTTTTCTCAAATCATGGTGAAATAAAATGGATAGACTTCGTCAGAG30.1359927470534905No Hit
GCCTGACCACGTGAGCATTGTGGAACCCAAAGATGAGATACTGCCCACCA30.1359927470534905No Hit
GTGCCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCGGGTGGAT30.1359927470534905No Hit
GCGTCTTGTTACTCCACGTGTCCTGCAGCACAAACGGCGGCGTATTGCTC30.1359927470534905No Hit
ACAATCTTCCTAGGAACAACATATGACGCACTCTCCCCTGAACTCTACAC30.1359927470534905No Hit
GTATTACTCGCATCAGGAGTATCAATCACCTGAGCTCACCATAGTCTAAT30.1359927470534905No Hit
GGAGGCTGAGGCAGGAGAATCACTTGAATCTGGGAGGCGGAGGTTGCATT30.1359927470534905No Hit
CTGCTGCTCCAGCTGAGGAGAAGAAAGTGGAAGCAAAGAAAGAAGAATCC30.1359927470534905No Hit
ACTACACCCTGCATGCTTCGAAACTCTGACAGCATACTGGAGGCCATTCA30.1359927470534905No Hit
ACATACCAGAATCTCTGGGACGCATTCAAAGCAGTGTGTAGAGGGAAATT30.1359927470534905No Hit
GTGACGACCTACGCACACGAGAACATGCCTCTCGCAAAGGATCTCCTTCA30.1359927470534905No Hit
GAAAAGAAGAGTCGGGGACCTCCTAGCCAGTTACATTCCAGAGGATGAGG30.1359927470534905No Hit
GGCCCGCAGGTCTAAGACCAAGGAAGCACGCAAGCGCCGTGAAGAGCGCC30.1359927470534905No Hit
ACATGGTGAAACCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCATG30.1359927470534905No Hit
TCCCTGGCCTGGTCTGCTGATGGCCAGACTCTGTTTGCTGGCTACACGGA30.1359927470534905No Hit
GGGATAAAGAAGGCTCCATAGAGTGGAGACATATTTAGAAAACGTGGGGC30.1359927470534905No Hit
CAATAAGGGTCTTCTTTAACATCTAAGATAGAGGTTTGGTTGGCCGGGCG30.1359927470534905No Hit
GGGTAAACAATATCTCTGGTATTGAAGAGGTGAATATGTTTACAAACCAA30.1359927470534905No Hit
CTGTTTATTAGCCACCTACCCCCACAGTAAATGTGCATATTCTGCAGAGA30.1359927470534905No Hit
AGATTACATTCTCAATTAGAAAACTGCAATTTGGTTCCACCACATCCTGA30.1359927470534905No Hit
GTGTTTATTTGTGGCCGAGTGTAACAACCATATAATAAATCACCTCTTCC30.1359927470534905No Hit
TGTTATCTGCCTTTTGGACTTCATCTTTCCCCACTCTTGTATGCCAGCCT30.1359927470534905No Hit
CCCCAGCTGTGGTCTCTGAGAGACTGAAGATTCGAGGCTCCCTGGCTAGG30.1359927470534905No Hit
CTTCCAATTCATGCTCTATGATAATAAAGCAATAAAATTGGAAATCAAAT30.1359927470534905No Hit
ACATAATGTTTGGTTCGTGTCTGGGCCCGTCTGTAACCTGCACTTTAAGA30.1359927470534905No Hit
GGTAGCATATGGTTGAAGGAGGACTGACTTGCAGATCAGATCTGAATTCA30.1359927470534905No Hit
TCGTGAAACTGCTCAGGCCATCAAGGGTATGCATATACGAAAAGCCACGA30.1359927470534905No Hit
ATCCAGCTCCAATAGATACATCGAGTCGAGAAGTCAGGGGGTTTCCCTTA30.1359927470534905No Hit
CACTGGCACCTGGTATGGAGATCAACAGTTGCTCAAAGGAATTTTAAATA30.1359927470534905No Hit

[OK]Adapter Content

Adapter graph