FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008161186

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008161186
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences2532
Total Bases427 kbp
Sequences flagged as poor quality0
Sequence length25-200
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ATCTCTCCCAGTCCTAGCTGCTGGCATCACTATACTACTAACAGACCGCA150.5924170616113744No Hit
CTCCTAAACACATCCGTATTACTCGCATCAGGAGTATCAATCACCTGAGC90.35545023696682465No Hit
GGAACAGGTTGAACAGTCTACCCTCCCTTAGCAGGGAACTACTCCCACCC80.315955766192733No Hit
GACTTAAACAGCTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAA80.315955766192733No Hit
ATATTGCTTAGCGTTAAGTTTTTAACGTAATTTTAATAGCTTAAGATTTT70.2764612954186414No Hit
GTTCTGAAGACTGCCCTCATCCACGATGGCCTAGCACGTGGAATTCGCGA70.2764612954186414No Hit
GACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTCATCCGC60.23696682464454977No Hit
GCTTATTACAATTTTACTGGGTCTCTATTTTACCCTCCTACAAGCCTCAG60.23696682464454977No Hit
GTGAAATTCCATCTCAAAAACAAACAATTAAAAAAAAATAAATTTTAGTG60.23696682464454977No Hit
CTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAGC60.23696682464454977No Hit
TTCTAATTCAGGTGTCTACTTATTTTATGTAAGAATAATTTTAGATTTCC60.23696682464454977No Hit
GATCACTTGAGGCCCAGAATTCAAGACCAGCCTGGTCAACACGGCAAAAC60.23696682464454977No Hit
GTCCCAGAAATATAAAGAAGATGGCATTAAAATGTCCTATATGTTGGCAG60.23696682464454977No Hit
TCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCTTC50.1974723538704581No Hit
GTCCTAGCTGCTGGCATCACTATACTACTAACAGACCGCAACCTCAACAC50.1974723538704581No Hit
CAATGTCAGGAGATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCT50.1974723538704581No Hit
ATTTCGGCTCACTGCAACCTTCGCCTCCTGGGTTCAAGCGATTCTGTGTC50.1974723538704581No Hit
GTGCCAGGCACACTGTAGGGTCCAAGAAGAGGGCCTCTGGCCAGGCTTAG50.1974723538704581No Hit
GTAGTAGCCTAGAGCGCCAGGGGCGGAAATTCGCCTGAAAAGTTTTGCCG50.1974723538704581No Hit
GAGATGGGGTTTCACCATGTTGGCCAGGCTGGGCTCAAACTCCTGACCTC50.1974723538704581No Hit
GCCAACATGGTGAACCCGTCTCTACTAAAAATACAAAAATTGGGCCGGGC50.1974723538704581No Hit
GCCCACAAACTCTTTAACAACTTGAAATAAATGTGTGGACTTAATTCACC50.1974723538704581No Hit
CTCTTCTCCGAGGCTAGTTCCACTTCTAAAAGCCACTCCTGGCCGGGTGC50.1974723538704581No Hit
GTCCTACTTCTCCTATCTCTCCCAGTCCTAGCTGCTGGCATCACTATACT50.1974723538704581No Hit
GGGCAATATGGTGAGATCTCATCTCTACAAAAAATATTTTGTTTATTTAT50.1974723538704581No Hit
AGTCCCAGCTACTTGGGAGGCCGAGGCAGGAGAATGGTGTGAACCCGGGA50.1974723538704581No Hit
GATGCCAACACAGCAGCCATTCAAGCAATCCTATACAACCGTATCGGCGA50.1974723538704581No Hit
GGCCTAGAGATGGAGGTCATGATGACTGCAAGGAAGAGACTGGACCCATA40.1579778830963665No Hit
CCATAAACCTGGAGTGACTATATGGATGCCCCCCACCCTACCACACATTC40.1579778830963665No Hit
ATGCTCTGAAATCTGTGGAGCAAACCACAGTTTCATGCCCATCGTCCTAG40.1579778830963665No Hit
CCTTGTAGAGAGAGTAAAAAATTTAACACCCATAGTAGGCCTAAAAGCAG40.1579778830963665No Hit
CAATGAACCATAACCAATACTACCAATCAATACTCATCATTAATAATCAT40.1579778830963665No Hit
GATATTTAGTGAGCTGGTGAATGGATGAATGAATGGAATTAGTGGGAACT40.1579778830963665No Hit
CCTAGCAGGTGTCTCCTCTATCTTAGGGGCCATCAATTTCATCACAACAA40.1579778830963665No Hit
CTCTATGACCCCTGCTTTCTCCTTCAGCTCTTCAGTGAGCTGACCAGGCC40.1579778830963665No Hit
AATTATAGGTGTGAGCCACAGCACCCAGCCAAAAAAGTAATTTTTTTTAG40.1579778830963665No Hit
AGCCAGGTGTGGTGACAGGCACCTGTAATCCCAGCTACTCAAGAGGGTGA40.1579778830963665No Hit
GCCCGCCTGCACCCAGGTGAAATATACAGCCTTGTTGCTCACACAAAGCC40.1579778830963665No Hit
TAGCATCACTCAAGTCTCTATTTATGAGGTGGACAAGCAAGATTGTCGCA40.1579778830963665No Hit
TTGGGAGGCTGAGGCAGGAGGGTCATTTGAGCTCAGGGGTTCAAGACTCA40.1579778830963665No Hit
GGCTACTATGAGCAATGATATGTCAGTAAATTGGAAAACCTAGAAGAAAT40.1579778830963665No Hit
ACTCCAGGAAGCTAAGCACTCGGAGTTATATATGCAGGTGGATTTGGGCT40.1579778830963665No Hit
GTGCCCACCAGAAGTATGTCCGACAAGCCTGGCAGAAGGCAGACATCAAT40.1579778830963665No Hit
GGATATCCAGACCATCTTGGCTAACATGGTGAAACCCCGTCTGTACTAAA40.1579778830963665No Hit
GGGCATGGCATCCTGCTCGTGTAGCCTTCTCTGTGGCACGCGCTGGGCAG40.1579778830963665No Hit
TGACTATACAACTCAAATGTTCTTCTCACCAGTTACGCATGTGTTTTATA40.1579778830963665No Hit
GGCTGGAGTACAGTGGCGCGATCTCGGCTTACTGCAACCTCTGCCTCCCA40.1579778830963665No Hit
GTATATCATCTCCGTGAAGGGGATCAAGGGACGGCTGAACAGACTTCCCG40.1579778830963665No Hit
CCTGCCCCTGAGAAGAGACTGGGCTGGGCCAGAGACCAATCCACGGGGGA40.1579778830963665No Hit
ATTTTATCTTATGCATATTCTGCCACAATAATAAACAGGGATAAAAAGCA40.1579778830963665No Hit
GATTGAGGCCCTGCGCAGGGCCAAGTTCAAGTTTCCTGGCCGCCAGAAGA40.1579778830963665No Hit
CCAACATGGTGAAACCCCATCTCTACTAAAACTACAAAATTAGCCAGGTG40.1579778830963665No Hit
CATATACACCCTCCCAAGACTAAACCAGGAAGAAGTCGAATCTCTGAATA40.1579778830963665No Hit
CCTTCTTCGACCCCGCCGGAGGAGGAGACCCCATTCTATACCAACACCTA40.1579778830963665No Hit
CCTCAGAGCCCTTGCCCGCTCGGGTATGAAGATCGGGCGGATTGAGGATG40.1579778830963665No Hit
GGTGAAACCACGTCTTTACTAAAAATACAAAAATTCGCTGGGCATGGTGG40.1579778830963665No Hit
CCATCACCTAGCTGCCTGCACCTGCCCTTCAGGGAGATGGGGGTCATTAA30.11848341232227488No Hit
GGACTTGATGTTCCATGAGAATTCATACAACCCTCTGCAGAACTTCCCCA30.11848341232227488No Hit
GGATGTGCTCTCGAGAAATATCCCTGAATGAGGAGTATGGTTAACTCCAC30.11848341232227488No Hit
CTGTAAGGCGTGGAATAGGAGTTGCTCAGTGGATTGGTTCTATGTTGTGG30.11848341232227488No Hit
GGCTAGCTTTGTTTAATGTCTTATGAAATTTTCATGAACAATCCAAGCAT30.11848341232227488No Hit
CATCAAACTCCGGGCCACAGGAGGAAATAGGACCAAGACCCCTGGACCTG30.11848341232227488No Hit
ACATGATCCCGCTGCCGCCCTCATTCCTAATCCACAGAGGCCCCTGACAC30.11848341232227488No Hit
AATCAATATATGTAGGTAAAAAATAAAACATAGGAATAATCTAGATATAA30.11848341232227488No Hit
CTACTCCCACTAATAGCTTTTTGATGACTTCTAGCAAGCCTCGCTAACCT30.11848341232227488No Hit
GATGAATGTGGTGCTGGGGTGTTTATGGCAAGTCACTTTGACAGACATTA30.11848341232227488No Hit
GCGTATTGCTCTGAAGAAGCAGCGTACCAAGAAAAATAAAGAAGAGGCTG30.11848341232227488No Hit
CTGCTACTCAGCCTGAGGTTGCAGACTGGTCTGAAGGTGTACAGGTGCCC30.11848341232227488No Hit
AAGAACAGTGGTGGCTCAAGCTACGGCCCCTCATGAAAATCCTGGCCAAG30.11848341232227488No Hit
ACCCTAGGGATAACAGCGCAATCCTATTCTAGAGTCCATATCAACAATAG30.11848341232227488No Hit
GTTATGGGAAGGTATCCAGGCGAGGTGGTCATCAAAATAGCTACAAACCA30.11848341232227488No Hit
CTGGAATGCAGGCATCATGACGGTGATGTCAGCTCTGTCGGTGGCCCCCT30.11848341232227488No Hit
GGGCACGGTGGCTCACACTTGTAATTCCAGCACTTTGGGAGGCTGAAGCG30.11848341232227488No Hit
TCCTTATCGAGGAGCAGAAAATCGTTGTGAAAGTGTTGAAGGCACAAGCA30.11848341232227488No Hit
CCTGTACCTCCGGGGTGGCGCTGGGGTTGGCTCCATGACCAAGATCTATG30.11848341232227488No Hit
CTATTTATCCTCTCCATGATGTCTTCGTTAGAAAAGTAAAAATGCTGAAG30.11848341232227488No Hit
GAGGAAGGCGAGTTTTCAGAGGCCCGTGAAGATATGGCTGCCCTTGAGAA30.11848341232227488No Hit
TCGTCACAGTGGGCGAGTGCCGGCCTCTGAGCAAGACAGTGCGCTTCAAC30.11848341232227488No Hit
GTCCAAGATAGAATCTTAGTTCAACTTTAAATTTGCCCACAGAACCCTCT30.11848341232227488No Hit
GCTTACAAGAAACAGTTCTCTCAATACATAAAGAACAGCGTAACTCCAGA30.11848341232227488No Hit
GATTATAACTGCTCAATAAATTATCTTGTGCTTTGCCTCTGTGTAATGAG30.11848341232227488No Hit
CCTGTTACAGACCAAGGAGAACTGGAGAAAGAAAGAGAAAATCAGTTCGT30.11848341232227488No Hit
CACGCGAGCTGCTTCCACAGCGCGGCACCTGTACCTCCGGGGTGGCGCTG30.11848341232227488No Hit
GTCAAGGAGCTGGAAGTGCTGCTGATGTGCAACAAATCTTACTGTGCCGA30.11848341232227488No Hit
TACCAAGACCCTGGTGAAGAATTGCATCGTGCTCATCGACAGCACACCGT30.11848341232227488No Hit
TCCTGACACTAAGGAAATGCTGAAGCTTTTGGACTTCGGCAGTCTGTCCA30.11848341232227488No Hit
GGGTGTGGCCATGAATCCTGTGGAGCATCCTTTTGGAGGTGGCAACCACC30.11848341232227488No Hit
GCTTTATGTAATAACTGTTCCAGATTTATTTTTCTGTCGTAAGTGTACCT30.11848341232227488No Hit
CCCTTCCCGAGGCCCCTACCACTTCCGGGCCCCCAGCCGCATCTTCTGGC30.11848341232227488No Hit
CTCCCAAAGTGCTAGGATTACACGTGTGAGCCACAGCGCCTGGCCCCGCT30.11848341232227488No Hit
GCTTAAGGTTTTCTTAGAGAACGTTATTCGAGACGCCGTCACCTATACGG30.11848341232227488No Hit
GCCACACGATGGGCCAAGAAGATTGAAGCCAGAGAAAGGAAAGCCAAGAT30.11848341232227488No Hit
GCATGAAGACTGGCTTGTCTCAGTGTTTCAACCTCACCAGGGCTGTCTCT30.11848341232227488No Hit
CATCAAAGGACTCAGTGACAAGATGTGGATTAGCCTTATACATACTGGAA30.11848341232227488No Hit
TTGCCAGATGTCCTGAGGTGGGAGTGAGGGTGAACAGAATTGCCTCCCAG30.11848341232227488No Hit
GAGAATTAATGTGCGTATTGAGCACATTAAGCACTCTAAGAGCCGAGATA30.11848341232227488No Hit
GTTCAATGCTGATGAATTTGAAGACATGGTGGCTGAAAAGCGGCTCATCC30.11848341232227488No Hit
TTCCAGAGGACCTTGGCAGGAACTGTGCCCGGCTGCTGCTGGAGGAAATC30.11848341232227488No Hit
GCAGGAGCTACAAAGCCTGGCCCAGTGCTACCAGGGTGGTGACAGCCTCG30.11848341232227488No Hit
CTTAAAGTTTAGTTTAAAAGTTGTAGGTGATTAAAATAATTTGAAGGCGA30.11848341232227488No Hit
CTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCCTCACTATCTGCT30.11848341232227488No Hit
CCATATGCTGCTATGTTGGCTGCCCAGGATGTGGCCCAGAGGTGCAAGGA30.11848341232227488No Hit
CTGCAGAATGGCTCCCGCAAAGAAGGGTGGCGAGAAGAAAAAGGGCCGTT30.11848341232227488No Hit
GCCCCAGATTTGACGTGCAACTCAAAGACCTGGAAAAATGGCAGAATAAT30.11848341232227488No Hit
AATGAACGCTGCCGAATTCACTTCAAGCCTCCAAAGAATGAAAAAAAAAA30.11848341232227488No Hit
AAGTAGGATTTAGACACCTAGTAATAAGAGAAAGGACTTCGGGGTGAGGG30.11848341232227488No Hit
TTAAAAAGATGTTTCAACCATGCCGGGCGCAGTGGCCCAGCACTTAGGGA30.11848341232227488No Hit
GATCGAGACCATCCTGGCTAACACGGTGAAACCCTGTCTCTACTAAAAAC30.11848341232227488No Hit
GTGAATCCCCATCTCTACTAAAAATACAAAAATTAGCCAGGCATGGCGAT30.11848341232227488No Hit
GCCATAACCCAATACCAAACGCCCCTCTTCGTCTGATCCGTCCTAATCAC30.11848341232227488No Hit
AGAGAAAGAAGGTTAAGCTGGCTGTCCTGAAATATTATAAGGTGGATGAG30.11848341232227488No Hit
GTCAAAGCGAACTACTATACTCAATTGATCCAATAACTTGACCAACGGAA30.11848341232227488No Hit
ACAGAATAATCAAGAATGAAGTTAAGAAGCTTCAAAAGGCAGCTCTCCTG30.11848341232227488No Hit
CCTCTGCCCTTCCTTTCCCTGGGGTACTACTCTCCAGCTTGGGAGGAAGC30.11848341232227488No Hit
TCTCAAAGAAGTGGGGCTTCACCAAGTTCAATGCTGATGAATTTGAAGAC30.11848341232227488No Hit
CTTTTCAATCTCTCTAAAGAAGATGATGTCCGCCAGTATGTTGTAAGAAA30.11848341232227488No Hit
GATTTATGCTATCCGTCAGTCCATCTCCAAAGCCCTGGTGGCCTATTACC30.11848341232227488No Hit
CCAAACATCACTTTGGCTTCGAAGCCGCCGCCTGATACTGGCATTTTGTA30.11848341232227488No Hit
AGGCCGAGGTGGGCGGATCACCTGAGGTCAGGAGTTCAAGACCAGCCTGG30.11848341232227488No Hit
GGCGTGGTGGTATGCACCTGTAATCTCAGCTATTCAGGAGGCTGAGGCAG30.11848341232227488No Hit
GGCCAAGGTGGGTGGATCATGAGGTCAGGAGATCGAGACCATCCTGGCTA30.11848341232227488No Hit
GTATTGTTTGACCCTTAAGCTTTTACATCTCTTAGCATGGAGGACGAAGA30.11848341232227488No Hit
CAACACCCACTACCTAAAAAATCCCAAACATATAACTGAACTCCTCACAC30.11848341232227488No Hit
GCCATGGAACGCTTCCGCAACATGGACAAGAGAGCCACAACTGAGGACCG30.11848341232227488No Hit
GGCGTGGTGATTGAGTGCCTATAATTCCAACTATTAGGGAGGCTGAGGCA30.11848341232227488No Hit
GTCACCAAGTCTGCCCAGAAAGCTCAGAAGGCTAAATGAATATTATCCCT30.11848341232227488No Hit
CATTAGGCTTAAAAACAGATGCAATTCCCGGACGTCTAAACCAAACCACT30.11848341232227488No Hit
TTCTTGTACAGTACTCACCTATTTTAGAATGTGGTTGACTACAGGTAACC30.11848341232227488No Hit
GTGCTGGGCCATGTAAGGGCACTCAGTGTATTACCCGAGGGCTTTATACA30.11848341232227488No Hit
GCAGAACAATGTGGAACACAAGGTTGAAACTTTTTCTGGTGTCTATAAGA30.11848341232227488No Hit
GGATAAATCATGCTAAAGCGAGGATGAAACCGATATCGCCGATACGGTTG30.11848341232227488No Hit
GTGAGCATTGTGTTCTTGGCATGTGATCTGGGAAACTGATTGAATAATAC30.11848341232227488No Hit
GTGTGAGCCTGGGCATTCCCAGAGAGGAAGGGCCGCTGTGCACTGCCCGG30.11848341232227488No Hit
GCTTATCTCAGCATCTCAGTTCCTCCTGTCTTCCTTCCTCTACCCTTATG30.11848341232227488No Hit
CTTTTGAAGGGGAGAAATACTGATTTGAATGTATAAATACTGGCATATTT30.11848341232227488No Hit
GGTTCAGGCCAAACAAAGAAACCAAACAATCCTTCATCTAAAATTTATGA30.11848341232227488No Hit
GCTGCATAGTATTCAATGGTGTATATGTGCCACATTTTCTTAATCCAGTC30.11848341232227488No Hit
GGGGATTACAGGCACCTGCCACTACGCCCAGCTAATTTTTGTATTTTTAG30.11848341232227488No Hit
GCACTTTGGGAGGCTGAGGCAGGTGGATCACCTGAGATCAGGAGTTCGAG30.11848341232227488No Hit
ATCTACAAGCGTGGTTATGGCAAAATCAATAAGAAGCGAATTGCTTTGAC30.11848341232227488No Hit
CCCCAAAGCTGGTTTCAAGCCAACCCCATGGCCTCCATGACTTTTTC30.11848341232227488No Hit

[OK]Adapter Content

Adapter graph