FastQCFastQC Report
Wed 10 Jul 2024
EGAF00008163554

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008163554
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences198
Total Bases32.8 kbp
Sequences flagged as poor quality0
Sequence length25-200
%GC46

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[OK]Sequence Duplication Levels

Duplication level graph

[FAIL]Overrepresented sequences

SequenceCountPercentagePossible Source
TGTCACAAGTGTAAAATGAATACATTTAAAAACATAAAAGATACATTTCA52.525252525252525No Hit
GGCTGGAGTGCAGTGGCATGATCTCAGCTCACTGCAACCTCCATCTCCTG42.0202020202020203No Hit
CCCCAGAGGCTGAGGCAAGAGAATTGCTTAGAAGCCGGGAGGCAGAAGTT31.5151515151515151No Hit
GATCTCTACCATTTAATTAAGAAAGCAGTTGCTGTTCGAAAGCATCTTGA31.5151515151515151No Hit
GAAAATAGCCTTTGCCATCACTGCCATTAAGGGTGTGGGCCGAAGATATG31.5151515151515151No Hit
CCCCAGCATCACTCCCCAAGGAAGAGCCAATGTTTTCCACCCATAATCCT31.5151515151515151No Hit
ACCCAAGGAACCAAAATTGCATCTGATGGTCTCAAGGGTCGTGTGTTTGA31.5151515151515151No Hit
GTCAGCCCCAGCACAGGACAACATCTTGTTGATGCGGATGACGTGGAAGG21.0101010101010102No Hit
GCCTTACGAAAGGCGGCAAAAAGGGAGCCAAGAAGAAAGTGGTTGATCCA21.0101010101010102No Hit
GAATGACACAGCGTTCCCTTGAACTGTACGGCTCTTTGTGCAAATAAGTG21.0101010101010102No Hit
GTTCTGGGAAAGGGAAAGCTCCCAAAGCAGCCTGTCATCGTGAAGGCCAA21.0101010101010102No Hit
ATGTGGGTCTGTCTGAGCTCAGGCCACTAGCCTCAAAGTCACCCACAAAG21.0101010101010102No Hit
GTTCTAAAAAAATACTGCATAAACTAGCATAAACTAGATGTTGGCAGCGC21.0101010101010102No Hit
GTGCCCTCTGACCTGCCATGCGGAGGTGGGATTTGATACTGTACATTGTC21.0101010101010102No Hit
GGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCTGAGGCAGGTGGATCA21.0101010101010102No Hit
GGCTTTCTGCCCAGGAACACACGCCACCAAAAGGAGGGAATGAAAACAGG21.0101010101010102No Hit
TTCTAAACCTGAGGGAGTGGGCACGTGAGCACATAATGGCACCAGTGACA21.0101010101010102No Hit
AGTTTTGGGATTACAGGCATGAGCCACTGCAACCAGCCTAACGCTTTGTT21.0101010101010102No Hit
GTTCCTGGCTTCTGTGAGCACCGTGCTGACCTCCAAATACCGTTAAGCTG21.0101010101010102No Hit
TTATTTCTACCTCTTAAAGTCAATGATAATGTCACAAGTGTAAAATGAAT21.0101010101010102No Hit
CTTATTAACTGAGTAATTTTGAACAAGTTGGTTATTTTTGTCTTTTGTTT21.0101010101010102No Hit
ATCCTGGCCAATGTGGTGAAACCCCATCTCTGCTAAAAATACAAAAATTA21.0101010101010102No Hit
GGTCGAGGCGGGTGGATCATCTGAGGTCAGGAGTTTGAGACCAGCCTGGC21.0101010101010102No Hit
TCCCAGCGCTTTGGGAGACCGAGGTGGGTGGATCACGAGGTTGAGATCGA21.0101010101010102No Hit
CCTCTCTCGGGCAATCTCCAGCCGCTCACGCTCCTCGCGCTCCCACTGCG21.0101010101010102No Hit
TAAAATCCACACTTTAGATTCTTGCAACTGTATCATATGTAATAGTATCA21.0101010101010102No Hit
CCGGAACACCATTCTTCGCCAGGCCAGGAATCACAAGCTCCGGGTGGATA21.0101010101010102No Hit
GGTTAAGGAGGTTAAAACCATTAGTTCCAGTAATGCCAGTTCCCAAACAT21.0101010101010102No Hit
GTGGGAAGATGCTTATTTAGCTTGCTGCCATGCGAGGATGGGGGCCTAGG21.0101010101010102No Hit
ATCATGTCTTTTCCATGTGTACCTGTAATATTTTTCCATCATATCTCAAA21.0101010101010102No Hit
GTCACAGGCAGGTTTAATGGCCAGTTTAAAACTTATGCTATCTGCGGGGC21.0101010101010102No Hit
GTCCCTGCCCCCCGGTTTGGCAGTGAAGGAACTGAAATGAACCAGACACA21.0101010101010102No Hit
GCTACTCGGGAGGCTGAGGCAGGAGAATCCCTTGAACCTGGGAGGCGGAG21.0101010101010102No Hit
CCTTCATACCTCGCTCACTCTCATCAGCAGCTTTTTCAGCTTCTTCCAGC10.5050505050505051No Hit
CTAGTGCCTACCCTAGGGCTTCTCCTAGAAGCAGGAACTCAAAGAATCTT10.5050505050505051No Hit
AATGCCGAAAAGAGAGGCAAACGCCAGGTGCTTATTAGGCCGTGCTCCAA10.5050505050505051No Hit
GTGTGGTGGCTCATGCCTATAATCCCAGCACTTTGGGCAGCTGACATGGG10.5050505050505051No Hit
CCCCCAGGCAGTCCTGGGTCACGCGCACTTGTAGTAGCTTGCATTTACCA10.5050505050505051No Hit
ATGTAATATTGTCAATGAACTATACTTTAGT10.5050505050505051No Hit
GGCAGGGCCAGGGCTGGTGTCCCTAAGGTTGTACAGACTCTTGTGAATAT10.5050505050505051No Hit
CTGTACTCCAGCCTGGTGACCGAGCAAAACTCTGTCTC10.5050505050505051No Hit
TGGCAAACCATAGGCTGGGTCATGCCCCAACTCGCAGTGGGAAGATGCTT10.5050505050505051No Hit
AGGGGAGAGAGACTGACACTCCTCCCATTGTCTCTCCAGCGATCGCAGGA10.5050505050505051No Hit
GTGTTTCTATGCACTGGAGCTGATGGCTATGTTCCCAAGTATAGTCCAAT10.5050505050505051No Hit
GGATTCGTGTTCGCCGTGGTGGCCGAAAACGCCCAGTTCCTAAGGGTGCA10.5050505050505051No Hit
GCCCAAGTTTGAATTGGGAAAGCTCATGGAGCTTCATGGTGAAGGCAGTA10.5050505050505051No Hit
GAGTCGACCCTGCACCTGGTCCTGCGCCTGAGGGGTGGCTGTTAATTCTT10.5050505050505051No Hit
TCTGAGATCTGTGGTTACCAAGAAGGTAGTCAATGTGAAGGAAGGGCAAA10.5050505050505051No Hit
GTAATTATGTGTACATTAAATTAATAAAAGTTACTTCTAGTTATGATTTG10.5050505050505051No Hit
ATCAACGCAGAGTACATGGGGAAGG10.5050505050505051No Hit
CTGTCCTGCAGCTGTCAGCAGGAGGGCCTGGCTTTAATAAAGAGTGGACA10.5050505050505051No Hit
GTATCTTGGTAGGTCTCATGTCTAAACATGAAATTCATTCATGTTTTATA10.5050505050505051No Hit
ACCAAGATCACCCCCTTCCCTTTTCCTTATCCCACATGCTGACTCCAAGT10.5050505050505051No Hit
GAATGGATAACTGAAGTAATGGCAGTGGCTGAGAATAAAAAAGGGCAGAA10.5050505050505051No Hit
GAACGATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCCATTCC10.5050505050505051No Hit
CCCCAGGGCTGACCACCAGCCTCTCACGGAGGCATCTTATGTTAACCTAC10.5050505050505051No Hit
GTACATGGGGCTTTTCTCTCTCGCGCGCGGTGTGGTGGCAGCAGGCGCAG10.5050505050505051No Hit
TGCTTTACCCTGCTGGAGCTCATCAAGGACAATGGCAGCCTGTTGGGCAT10.5050505050505051No Hit
CGGAAGCTCCTGCCCCTAGGCAGTCCTGGGTCACGCGCACGTGTAGTAGC10.5050505050505051No Hit
GAGCTGGGAAAATTGTTGTGAACCTCACAGGCAGGCTAAACAAGTGTGGG10.5050505050505051No Hit
GCATTCGTATTGCGACGCTAGAGGTGAAATTCTTGGACCGGCGCAAGACG10.5050505050505051No Hit
GGGAGATGTAGCAAATTGAGTGTGGGTTTTGGAGTCTGAGCCTCAGGCTC10.5050505050505051No Hit
GCCATATATTGCATGGGGGTACCCCAATCTGAAGTCAGTAAATGAACTAA10.5050505050505051No Hit
CTGATTACCTACCAGGAATGTCAAGTGGCCTCGCTGAAAGTCTCGGCTCT10.5050505050505051No Hit
GCTCAGGAGCTTCTGGGAGATATAAGACTTTATCTGCCGGGCATGATGGC10.5050505050505051No Hit
ATCTTTAAATGAAATTCTTAGCTGGAAAAGTGACTAAAAAGTTTTTCTCC10.5050505050505051No Hit
CCCTTTAACAGCATCTGCTTCATTCCCCTCACCTTCCCAGGCTGATCTGA10.5050505050505051No Hit
GGCCAACATGGTGAAATCCCATCTCTACTAGAAAAAAAAAATTAAAAATT10.5050505050505051No Hit
CCACCATCATAGCCACCATCACCCTCCTTAACCTCTACTTCTACCTACGC10.5050505050505051No Hit
AATTGGGAGTGGTAGGATGAAACAATTTGGAGAAGATAGAAGTTTGAAGT10.5050505050505051No Hit
GGAGTATGGCAAACCATAGGCTGGGTCATGCCCCAACTCGCAGTGGGAAG10.5050505050505051No Hit
CCTCACCACAGGCCAGAAGCGTTACCTGTGCAGCATTGCTAAAATCTATA10.5050505050505051No Hit
CGCAGTGCCCTGGGCGTTCGACCCTCCCGGCTCAGACACCAACAGCCCCT10.5050505050505051No Hit
AAATGGTTCAGAATTAAACTTTTAATTCATT10.5050505050505051No Hit
GTCTCATTACTTTAAGCACCACGCTTGAGAATTCCAAGCCAACAGAAGAA10.5050505050505051No Hit
ACTCTCCTTCACTCTTATATAGATTTAAAATTGTGGTAAGTGCTTTGACC10.5050505050505051No Hit
GTTATCATGTCCATCCGCACCAAGCTGCAGAACAAGGAGCATGTGATTGA10.5050505050505051No Hit
TCCCAGATCTGACTTCACACTTCCCTTTTCTAGAACCTTTTGTAAAAGTT10.5050505050505051No Hit
TTGAGAAGGTGTTTCTATGCACTGGAGCTGATGGCTATGTTCCCAAGTAT10.5050505050505051No Hit
GGCCAAGGCCGATGGCATCGTCTCAAAGAACTTTTGACTGGAGAGAATCA10.5050505050505051No Hit
GGGCCCTTGTTTGTGCCAGATCCTTCAAAGATGTTCCCTGTCAGGACACC10.5050505050505051No Hit
GCCCGAATTTGTGCCAATAAGTACATGGTAAAAAGTTGTGGCAAAGATGG10.5050505050505051No Hit
TCACTATGTTGCTCAGGCTGGTCTCCAACTCCTGGCCTCAGCAATCCTCT10.5050505050505051No Hit
GGCAACAGAGCAAGACTCCTTCTAGGGGGGAAAAAAAAGGGCAGAATTGA10.5050505050505051No Hit
GGATTGACAGATTGATAGCTCATACTAGAGTCCGTGGGTGGTGGTGCATG10.5050505050505051No Hit
CCCCAGAGCAGGCTCGCGTCCTGAAGCTTTTTGGGTATGAGATGGCTGAA10.5050505050505051No Hit
AATATATCCTTAATAAAAACTCTCTCCTACATAGTAAAAGCATCATCTAA10.5050505050505051No Hit
GGTCAGGAGGGATGCCTTCCTTGTCTTGAATCTTTGCCTTGACATTCTCA10.5050505050505051No Hit
TGCCAACAGCATGCTGGGTAACATTGTAGACTCTTCCAGTTTTGCCAAGG10.5050505050505051No Hit
GATTCTGGGAGATTAATATAATAGGCAGAACTGGCAAAGCTAACCAAAAG10.5050505050505051No Hit
AAAAAGAATGAAAAGGAACAAACAAAACCTCAGAGAAATATGGAACTATG10.5050505050505051No Hit
GCTGGGCACGGTGGCTCACGCATGTAATACCAACGTTTTAGGAGGCCAAG10.5050505050505051No Hit
TTCTCGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGC10.5050505050505051No Hit
GACTCTCAAGATCTGGTTCCCATCCATTTATCAGCTCAATCTTCATGTTA10.5050505050505051No Hit
AAAAGAGGAAAAAAAAAAGTACAAAAGTTAGCCGGGCATGGTGGCGCACA10.5050505050505051No Hit
AACGAGTCCTGGCCTTGTCTGTGGAGACGGATTACACCTTCCCACTTGCT10.5050505050505051No Hit
AAACTGAGGAACGGAGAGACTAATACGGAGTACAGGAGGATTTGTTTATT10.5050505050505051No Hit
GTATTGGCATTTATAATACTGAACTATGGACCTATGAGGTAAGTGAATAG10.5050505050505051No Hit
GATGCTATCTTTCTTACATCTTTCTTTTTAGAAGTAACTTATTTCAATGT10.5050505050505051No Hit
CCTCCCGCCACCTCCACACACCAGGTGGCCCTGCAGAATGAGGGTTGGGC10.5050505050505051No Hit
GGCCCTCTCCGTGAAGGCGGCAATGCCTGTGGGTGTCGCCGTTGCCGTGA10.5050505050505051No Hit
AAGTCCTCCTCCTTAAACTAAAGGGCTGGGGATTTCAGAAAGGGTGAAGG10.5050505050505051No Hit
GATAAAAAAGGTCGGAGGATAGCTGAATTACAGTGTTGTTTAGGTCTGTA10.5050505050505051No Hit
AAGTACTGATTTTAAAAACTAATAACTTAAAACTGCCACACGCAAAAAAG10.5050505050505051No Hit
ACTCCAACCTCTGCCACCCGGGTTCAGGCGATTCTCCTGCCTCGGTTTCC10.5050505050505051No Hit
CTGGAAAGTCGGCCAAGAAAGACAAAGACCCAGTGAACAAATCCGGGGGC10.5050505050505051No Hit
GCCGAAGATATGCTCATGTGGTGTTGAGGAAAGCAGACATTGACCTCACC10.5050505050505051No Hit
CCCTTCACCATTTCCGACGGCATCTACGGCTCAACATTTTTTGTAGCCAC10.5050505050505051No Hit
GTGGAAGAAGTGTGGGGGGAGGTCATCGTAGGAAAAAGACCAGGTATAAA10.5050505050505051No Hit
TCCCTCCACTATTGTCCCATGACCCTGTCAAATCTCCCTCTGTGAGAAAC10.5050505050505051No Hit
GGGTGACAGAGTAAAACCTCTTCTC10.5050505050505051No Hit
CCCTGGAAGGGTGGTGTGTGGAACTGAACCTCCATGACAGTCTTGAGTTT10.5050505050505051No Hit
GGGGTTGGGAGTTCGAGACCAGCCTGACCAACATGGAGAAACTCTGTCTG10.5050505050505051No Hit
GGTAGTCAATGTGAAGGAAGGGCAAAACCAAGTAACTATTGAAACCAGAA10.5050505050505051No Hit
GCCTAATAAAAAACATTTATTTTCATTGC10.5050505050505051No Hit
AGTCTACAATGTTACCCCGCATGCTGTTGGCATTGTTGTAAACAAACAAG10.5050505050505051No Hit
AGTAGAGATTATAAAAAAAGAAACAAATAGAAATTCTAGATTTGAAAAGT10.5050505050505051No Hit
GTGTTGCACAAGTACGTTTTGTGACAGGCAATAAAATTTTAAGAATTCTT10.5050505050505051No Hit
GACTCATTCCAATTACAGGGCCTCGAAAGAGTCCTGTAGTGTTATTTTTC10.5050505050505051No Hit
GAGTACATGGGATGCGATTCTGGAGGCACGGGGGTAACTGAAAGTGAGTA10.5050505050505051No Hit
AGACCAGCCCAGGCAACATGGCGAAACCTTGTCTCTACAGAAAAATACAA10.5050505050505051No Hit
AGGTTGCAGTGAGCTGAGATCATGCCACTGCACTCCAGCCTGAGTGACAG10.5050505050505051No Hit
CTGAAGAAGACAGAGACGCAAGAGAAAAATCCACTGCCTTCCAAAGAAAC10.5050505050505051No Hit
GACTGGCATTGTATTAGCAAACTCATCACTAGACATCGTACTACACGACA10.5050505050505051No Hit
GGCGTGGCGGTGTGCGCCTGTAATCCCAGCTACTCGGGAAGCCGAGGCAG10.5050505050505051No Hit
GCCCAACATAGTGAAGCCCCATCTCTACTAAAAATACAAAATTAGCTGGG10.5050505050505051No Hit
CTTATGGAACTACCACTACTAGAACTACCCGTCCTACAGCTTCCTTGTTT10.5050505050505051No Hit
GACATGTTTGGGGTGATGCAGGACCCACAGACACATAGGAAGTTATTCCT10.5050505050505051No Hit
GTTCAATGGGGAGGACATCGACACCATCTCCCCAACGCTGGGCTTCAACA10.5050505050505051No Hit
CCTGTAATCCTAGCACTTTGGGAGGCCAAGGCGGGCAGATCACCTGAGGT10.5050505050505051No Hit
GCTCAACATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTATT10.5050505050505051No Hit
GGAGGTGGAGGCTGCAGTGAGCCGAGATCACGCCACTGCACTCCAGCCTG10.5050505050505051No Hit
GATTAAGTTAGGCAATTTCCAGTATGTTAAGTAACACACTTATTTTTGCC10.5050505050505051No Hit
CTAATAAAATAAACTATAAATAGATATTAATAGATTTACATAAAAAAAGA10.5050505050505051No Hit
GCAGTCCGCAGTCCGGCCTGGGCGACAGAGCGAGACTCCGTCTC10.5050505050505051No Hit
GCAGCAGCACAGTGCCCAGAGACAGCATGGCTCCTTGAGACCACATTCCT10.5050505050505051No Hit
GTAAAAGCATCATCTAAACAGCAGCTCCAACTGAG10.5050505050505051No Hit
GGATGATAAAACTTAAGCTTCTTTTTCAGATGTTTAAAAATTTCTATAAA10.5050505050505051No Hit
GTGTTTCTATGCCCTCGATCATAATGCAATGTTCCCAAGACTAGTCCAAT10.5050505050505051No Hit
GAATAGAGCAGCCCACTGTCTCATTACTTTAAGCACCACGCTTGAGAATT10.5050505050505051No Hit
GTGAGGTTGTCTAGTCCACGCTCGGAGCCATGCCGTCCAAGGGTCCGCTG10.5050505050505051No Hit
CTTGTGTTTTAATGCCAATAAATGTGCCAGCTGGGC10.5050505050505051No Hit
GGCCAGGAGCTTGCCTTTCCGCTGAGTCCAGATTGGCAGGTGGACTACGA10.5050505050505051No Hit
ACAAGAAGCATTAGAACAAACCATGCTGGGTTAATAAATTGCCTCATTCG10.5050505050505051No Hit
TTGGGAGACCGAGGTGGGTGGATCACGAGGTTGAGATCGAGACCATCCTG10.5050505050505051No Hit
GTGTTTCTGACTAGCTAAGGCTACTTCAGACTTTTCACTTTCCATTTGTC10.5050505050505051No Hit
CTTCTATGTAATTCGCAATGATTCCATCTAAATAAAAGTTCTATGATCTG10.5050505050505051No Hit
AAACTGTAGTGAGTATTAGGATCCATGACCCGTTATAGGGTGTACATCTT10.5050505050505051No Hit
CTCCAATGGATCCTCGTTAAAGGATTGAAAGTGGACTCATTCCAATTACA10.5050505050505051No Hit
CCATATATCCAAACAACAAAGCATAATATTTCGCCCACTAAGCCAATCAC10.5050505050505051No Hit
CTTCTGCCCTGGCCCCCAAGATCGGCCCCCTGGGTCTGTCTCCAAAAAAA10.5050505050505051No Hit
GTTTTAGCTGATCCATCTGTAATCCTCCCTGCCTGTGTCTATTATTATAT10.5050505050505051No Hit
CGCCGCTCCCGTCCACTCTCGACTGCCGGCGACGGCCGGGAATGGGCCCG10.5050505050505051No Hit
GATATATACCATGTAAATGAATAAAGACATTTTAAATTT10.5050505050505051No Hit
GGGCATGGTGGCGCGCGCCTGTAGTCCCAGCTACACGGGAGGCTGAGGCA10.5050505050505051No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)