FastQCFastQC Report
Thu 31 Aug 2023
EGAF00008178675

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008178675
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences7732439
Sequences flagged as poor quality0
Sequence length56
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN284270.36763303273391484No Hit
AAATAATTCAAGCACTGCTCATTACAATTTTACTGGGTCTCTATTTTACCCTCCTA89010.11511245028897092No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)