FastQCFastQC Report
Thu 31 Aug 2023
EGAF00008178709

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008178709
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences35392349
Sequences flagged as poor quality0
Sequence length33-56
%GC46

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN1051500.2970981101028361No Hit
ATTTTTTGTAGCCACAGGCTTCCACGGACTTCACGTCATTATTGGCTCAACTTTCC407380.11510397346047871No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)