FastQCFastQC Report
Thu 31 Aug 2023
EGAF00008180693

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008180693
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21471147
Sequences flagged as poor quality0
Sequence length150
%GC53

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GCTGCGGATATGGGTACGGCCCGGCGCGAGATTTACACCCTCTCCCCCGG231280.10771664876589966No Hit
CTGGTCTGTCTTGCGCCGGTCCAAGAATTTCACCTCTAGCGGCGCAATAC230110.10717173144033712No Hit
CCACCTACTAAGAACGGCCATGCACCACCACCCACGGAATCGAGAAAGAG228670.1065010639627217No Hit
GTTCTCGTTTGAATATTTGCTACTACCACCAAGATCTGCACCTGCGGCGG226770.10561615548531245No Hit
ACCTTTAAGTTTCAGCTTTGCAACCATACTCCCCCCGGAACCCAAAGACT219900.10241651272752218No Hit
GTCTCGTTCGTTATCGGAATTAACCAGACAAATCGCTCCACCAACTAAGA216930.10103326105494038No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)