FastQCFastQC Report
Mon 4 Sep 2023
EGAF00008206193

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008206193
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16757785
Sequences flagged as poor quality0
Sequence length50-150
%GC61

[OK]Per base sequence quality

Per base quality graph

[WARN]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[FAIL]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
AGCGCCGTTTTTTCCCCGGCCGTTTTTCCACACTTGGCAAGGAGCCGTCA1402930.8371810474952388No Hit
TCGTAGGTCTTGCCGGTCTGGCGCGGGATCGACAGCACCGTGTTGCGGGC168360.10046673829506704No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)