FastQCFastQC Report
Fri 29 Sep 2023
EGAF00008243270

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008243270
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences16182372
Sequences flagged as poor quality0
Sequence length70-100
%GC49

[FAIL]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[WARN]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[WARN]Per base N content

N content graph

[WARN]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CCTCACCCGGCCCGGACACGGACAGGATTGACAGATTGATAGCTCTTTCTCGATTCCGTGGGTGGTGGTG229900.14206817146460357No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.11.9)