FastQCFastQC Report
Fri 10 May 2024
EGAF00008248003

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008248003
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences46082644
Total Bases1.4 Gbp
Sequences flagged as poor quality0
Sequence length31
%GC37

[OK]Per base sequence quality

Per base quality graph

[FAIL]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
ACAAAAAAAAAAAAAAAAAAAAAAAAAAAAA626670.1359882909496252No Hit
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA524030.11371526338636298No Hit
CATCATCTTACAAAAAAAAAAAAAAAAAAAA487380.10576216069546704No Hit
CCTCTGCAAAAAAAAAAAAAAAAAAAAAAAA486570.10558638953094791No Hit

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)