FastQCFastQC Report
Mon 13 May 2024
EGAF00008264032

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008264032
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences55857331
Total Bases8.3 Gbp
Sequences flagged as poor quality0
Sequence length150
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[FAIL]Per base sequence content

Per base sequence content

[WARN]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[WARN]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GATCGGAAGAGCACACGTCTGAACTCCAGTCACTTAGGCATCTCGTATGC608250.1088934951080996TruSeq Adapter, Index 3 (100% over 50bp)

[WARN]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)