FastQCFastQC Report
Fri 10 May 2024
EGAF00008272979

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008272979
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21398340
Total Bases556.3 Mbp
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTTTTACTTCCTCTAGATAGTCA289460.13527217531827235No Hit
CGTTCGTTATCGGAATTAACCAGACA284900.13314116889440955No Hit
GTCTCGTTCGTTATCGGAATTAACCA214470.10022740081707271No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)