FastQCFastQC Report
Thu 9 May 2024
EGAF00008272982

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008272982
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences21868100
Total Bases568.5 Mbp
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
TGACTTTTACTTCCTCTAGATAGTCA305290.13960517831910407No Hit
CGTTCGTTATCGGAATTAACCAGACA292570.13378848642543248No Hit
GTCTCGTTCGTTATCGGAATTAACCA224720.10276155678819833No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)