FastQCFastQC Report
Wed 8 May 2024
EGAF00008273000

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008273000
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences28963668
Total Bases753 Mbp
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
CGTTCGTTATCGGAATTAACCAGACA416930.14394930918280102No Hit
TGACTTTTACTTCCTCTAGATAGTCA411080.14192953737765535No Hit
GTCTCGTTCGTTATCGGAATTAACCA362040.12499798022819486No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)