FastQCFastQC Report
Wed 8 May 2024
EGAF00008273033

Summary

[OK]Basic Statistics

MeasureValue
FilenameEGAF00008273033
File typeConventional base calls
EncodingSanger / Illumina 1.9
Total Sequences29843425
Total Bases775.9 Mbp
Sequences flagged as poor quality0
Sequence length26
%GC48

[OK]Per base sequence quality

Per base quality graph

[OK]Per tile sequence quality

Per tile quality graph

[OK]Per sequence quality scores

Per Sequence quality graph

[OK]Per base sequence content

Per base sequence content

[OK]Per sequence GC content

Per sequence GC content graph

[OK]Per base N content

N content graph

[OK]Sequence Length Distribution

Sequence length distribution

[FAIL]Sequence Duplication Levels

Duplication level graph

[WARN]Overrepresented sequences

SequenceCountPercentagePossible Source
GTCTCGTTCGTTATCGGAATTAACCA546330.18306544908970734No Hit
CGTTCGTTATCGGAATTAACCAGACA452210.1515275140169066No Hit
TGACTTTTACTTCCTCTAGATAGTCA412910.13835878422131506No Hit
CCACCTACTAAGAACGGCCATGCACC345200.11567036960402499No Hit
ACCTTTAAGTTTCAGCTTTGCAACCA310710.10411338510911532No Hit

[OK]Adapter Content

Adapter graph

Produced by FastQC (version 0.12.1)